| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G058128_T02 |
| Family | CBM22 |
| Protein Properties | Length: 528 Molecular Weight: 60088 Isoelectric Point: 6.6783 |
| Chromosome | Chromosome/Scaffold: 7 Start: 43120988 End: 43134707 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM22 | 2 | 125 | 9.5e-33 |
| GSCRLSIQTEAPHMLPSILKDRASQKHISGHYILATNRTDVWMGPSQVITDKLRLHVTYRVSAWVRVGSGGHGRHHVNVCLAVDKNQWVNGGQVDADGDQ WYEIKGAFKLEKQPSKVTAYVQGP | |||
| GH10 | 183 | 464 | 0 |
| QTENSFPFGSCIARHNIENEDLAEFFVKNFNWAVFENELKWYHTEAEQGRLNYKDSDELLEFCEKHKIQVRGHCLFWEVEDAVQPWVQSLQGHHLMAAIQ NRLQSLLSRYKGRFRHHDVNNEMLHGSFYEDRLGRDIRAYMFREAHKLDPSAVLFVNDYNVEDGCDTKSTPEKLVEQVVDLQDRGAPVGGIGVQGHISHP VGEIICDSLDKLAILGLPIWITELDVTAENEHIRADDLEVFLREAFAHPAVGGIILWGFWEMFMFREHAHLVDADGTINEAG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 528 Download |
| MGSCRLSIQT EAPHMLPSIL KDRASQKHIS GHYILATNRT DVWMGPSQVI TDKLRLHVTY 60 RVSAWVRVGS GGHGRHHVNV CLAVDKNQWV NGGQVDADGD QWYEIKGAFK LEKQPSKVTA 120 YVQGPPAGVD IRVMDFQIYA VDRKARFEYL KEKTDKVRKR DVVLKFQGSN AVNLLGSSLR 180 IQQTENSFPF GSCIARHNIE NEDLAEFFVK NFNWAVFENE LKWYHTEAEQ GRLNYKDSDE 240 LLEFCEKHKI QVRGHCLFWE VEDAVQPWVQ SLQGHHLMAA IQNRLQSLLS RYKGRFRHHD 300 VNNEMLHGSF YEDRLGRDIR AYMFREAHKL DPSAVLFVND YNVEDGCDTK STPEKLVEQV 360 VDLQDRGAPV GGIGVQGHIS HPVGEIICDS LDKLAILGLP IWITELDVTA ENEHIRADDL 420 EVFLREAFAH PAVGGIILWG FWEMFMFREH AHLVDADGTI NEAGRRYLAL KQEWLTRMNG 480 SVDHQGEFKF RGYHGSYTVE VNTPSGKVAR SFVVDKDSPV QVIALNV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11790 | Glyco_hydro_cc | 0.006 | 398 | 467 | 81 | + Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781. | ||
| pfam02018 | CBM_4_9 | 8.0e-9 | 21 | 127 | 109 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 9.0e-42 | 175 | 441 | 288 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 7.0e-76 | 185 | 471 | 307 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 7.0e-79 | 221 | 466 | 267 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ03745.1 | 0 | 1 | 527 | 557 | 1082 | hypothetical protein OsI_25875 [Oryza sativa Indica Group] |
| RefSeq | XP_002459803.1 | 0 | 1 | 527 | 572 | 1098 | hypothetical protein SORBIDRAFT_02g010990 [Sorghum bicolor] |
| RefSeq | XP_002459803.1 | 0.000000009 | 26 | 138 | 84 | 199 | hypothetical protein SORBIDRAFT_02g010990 [Sorghum bicolor] |
| RefSeq | XP_002459803.1 | 0.0001 | 32 | 133 | 425 | 528 | hypothetical protein SORBIDRAFT_02g010990 [Sorghum bicolor] |
| RefSeq | XP_002459803.1 | 0.00000003 | 32 | 138 | 257 | 367 | hypothetical protein SORBIDRAFT_02g010990 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1i1x_A | 2e-31 | 190 | 461 | 18 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1i1w_A | 2e-31 | 190 | 461 | 18 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1xyz_B | 3e-31 | 174 | 445 | 23 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 3e-31 | 174 | 445 | 23 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 2bnj_A | 5e-31 | 190 | 461 | 18 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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