| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G059845_T01 |
| Family | GT47 |
| Protein Properties | Length: 419 Molecular Weight: 47159.3 Isoelectric Point: 6.7313 |
| Chromosome | Chromosome/Scaffold: 6 Start: 162559883 End: 162562784 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT47 | 51 | 346 | 0 |
| RLKVYVYELPPKYNKNVVAKDSRCLSHMFATEIFMHRFLLASAVRTLNPDEADWFYTPVYTTCDLTPWGHPLTVKSPRMMRSAIQYVSKRWPYWNRTEGA DHFFVTPHDFGACFYFQEEKAIQRGVLPVLRRATLVQTFGQKNHVCLREGSITIPPYAPPHKIRAHIVPPETPRSIFVYFRGLFYDTANDPEGGYYARGA RASVWENFKNNALFDISTEHPPTYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIAVFVPEDDVLRLDTILTSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 419 Download |
| MGGTGSATAA QALALAALLL ACSGVAVVTA QDIERIQGSA GDVLEDDPVG RLKVYVYELP 60 PKYNKNVVAK DSRCLSHMFA TEIFMHRFLL ASAVRTLNPD EADWFYTPVY TTCDLTPWGH 120 PLTVKSPRMM RSAIQYVSKR WPYWNRTEGA DHFFVTPHDF GACFYFQEEK AIQRGVLPVL 180 RRATLVQTFG QKNHVCLREG SITIPPYAPP HKIRAHIVPP ETPRSIFVYF RGLFYDTAND 240 PEGGYYARGA RASVWENFKN NALFDISTEH PPTYYEDMQR AIFCLCPLGW APWSPRLVEA 300 VVFGCIPVII ADDIVLPFAD AIPWEEIAVF VPEDDVLRLD TILTSIPMDE ILRKQRLLAN 360 PSMKQAMLFP QPAEPRDAFH QVLNGLARKL PHPKDVFLKP GQKVLNWTEG AQDDLKPW* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-82 | 51 | 346 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF87529.1 | 0 | 1 | 418 | 1 | 418 | unknown [Zea mays] |
| GenBank | ACG31432.1 | 0 | 3 | 418 | 2 | 419 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| GenBank | ACG36767.1 | 0 | 3 | 418 | 2 | 417 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | NP_001147714.1 | 0 | 1 | 418 | 1 | 418 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | XP_002440185.1 | 0 | 22 | 418 | 20 | 416 | hypothetical protein SORBIDRAFT_09g027450 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
