| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G060579_T01 |
| Family | GT47 |
| Protein Properties | Length: 501 Molecular Weight: 55890.9 Isoelectric Point: 9.5435 |
| Chromosome | Chromosome/Scaffold: 7 Start: 158298323 End: 158303877 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 103 | 423 | 0 |
| PVKIYLYDLPAKFTYGVVRSYKAARATSGSADAAATLPDEQLRYPGHQHSAEWWLFKDLLRRRPQDRPVARVDDPSDADLFYVPFFSSLSLVVNPIRSPL AANASGAGTAYSDEALQEELLEWLERQLYWQRHRGRDHVFICQDPNALYRVVDRISNAVLLVSDFGRLRSDQASLVKDVILPYSHRINSFKGEVGVDGRP SLLFFMGNRYRKEGGKVRDALFQILENEDDVTIKHGTQSRESRREATQGMHSSKFCLHPAGDTPSACRLFDALVSLCVPVIASDYIELPFEDIIDYNKIS IFVGTSKAVQPGYLTSTLRRI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 501 Download |
| MWERGRPPRK PRPSPILVPP PPSSPPPRLN LLLPRSLLAL AARAMPSRRP SPVLLLLLAL 60 SLALLFLLLS PSFPSTSRFS RSLSSGSAFA SSSPASTSAP PAPVKIYLYD LPAKFTYGVV 120 RSYKAARATS GSADAAATLP DEQLRYPGHQ HSAEWWLFKD LLRRRPQDRP VARVDDPSDA 180 DLFYVPFFSS LSLVVNPIRS PLAANASGAG TAYSDEALQE ELLEWLERQL YWQRHRGRDH 240 VFICQDPNAL YRVVDRISNA VLLVSDFGRL RSDQASLVKD VILPYSHRIN SFKGEVGVDG 300 RPSLLFFMGN RYRKEGGKVR DALFQILENE DDVTIKHGTQ SRESRREATQ GMHSSKFCLH 360 PAGDTPSACR LFDALVSLCV PVIASDYIEL PFEDIIDYNK ISIFVGTSKA VQPGYLTSTL 420 RRISSERILE YQREIKKVRH YFEYEDPNGP VNEIWRQVSL KAPLIKLLTN RDKRLLERGT 480 NGTDCSCICS TTPTDITAAS * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-65 | 104 | 423 | 331 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG27631.1 | 0 | 104 | 500 | 60 | 456 | exostosin-like [Zea mays] |
| GenBank | ACN31783.1 | 0 | 104 | 500 | 104 | 500 | unknown [Zea mays] |
| GenBank | EEE67431.1 | 0 | 1 | 492 | 1 | 494 | hypothetical protein OsJ_24780 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060019.1 | 0 | 1 | 492 | 1 | 494 | Os07g0567000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002460871.1 | 0 | 43 | 500 | 43 | 500 | hypothetical protein SORBIDRAFT_02g036640 [Sorghum bicolor] |
