| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G077299_T01 |
| Family | GH51 |
| Protein Properties | Length: 695 Molecular Weight: 76548.4 Isoelectric Point: 5.5164 |
| Chromosome | Chromosome/Scaffold: 4 Start: 186274255 End: 186280328 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 213 | 685 | 0 |
| LQNLASATVTVSGESNWIKVEQKLVAKGTNRTSRLQITTNKKGVVWFDQVSLMPEDTYKGHGFRTELISMILDLKPRFLRFPGGCFVEGGWLRNAFRWRE SIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLAEDLGTEPIWVFNNGVSHNDEVDTVAIAPFVKDVLDSIEFARGSANSTWGSVRAAMGHPEPFPVKYVA IGNEDCGKKFYRGNYLKFYNAIRQAYPDIQMISNCDGSSTPLDHPADLYDFHVYNDSKTLFNMKSTFDRTSRSGPKAFVSEYAVWRGDAGRGSLLASLAE AAFLTGLEKNSDIVSMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTISSSYSGSLAASAITWQDSENSFLRVKVINFGS DAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLAPRSFSSFDLAL | |||
| Full Sequence |
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| Protein Sequence Length: 695 Download |
| MPCTRRRGAR VFLRMVDACM HGRHAGPTRI DKWKRMGITS NDAAPRAVLL RFLFLLCIGC 60 KCLASEVEAT QTATLAVDAS PQLARKIPDT LFGIFFEEIN HAGAGGIWAE LVSNRGFEAG 120 GLHTPSNIDP WSIIGDDSSV FVETDRTSCF SRNIVALRME VLCDNCPTGG VGVYNPGFWG 180 MNIEEGKVYN LVMFVKSPET TDLTVSLTSS NGLQNLASAT VTVSGESNWI KVEQKLVAKG 240 TNRTSRLQIT TNKKGVVWFD QVSLMPEDTY KGHGFRTELI SMILDLKPRF LRFPGGCFVE 300 GGWLRNAFRW RESIGPWEER PGHFGDVWHY WTDDGLGYYE FLQLAEDLGT EPIWVFNNGV 360 SHNDEVDTVA IAPFVKDVLD SIEFARGSAN STWGSVRAAM GHPEPFPVKY VAIGNEDCGK 420 KFYRGNYLKF YNAIRQAYPD IQMISNCDGS STPLDHPADL YDFHVYNDSK TLFNMKSTFD 480 RTSRSGPKAF VSEYAVWRGD AGRGSLLASL AEAAFLTGLE KNSDIVSMAS YAPLFVNDND 540 QTWNPDAIVF NSWQHYGTPS YWMQTLFRES SGAMFHPTTI SSSYSGSLAA SAITWQDSEN 600 SFLRVKVINF GSDAVTLTIS TSGLQASINA LGSTATVLTS ADVMDENSFS NPTKVVPVKS 660 DLSNAAEQMQ VTLAPRSFSS FDLALAQSKL VAEM* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 1.0e-31 | 492 | 677 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 5.0e-35 | 274 | 679 | 482 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 2.0e-46 | 492 | 677 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27961.1 | 0 | 52 | 694 | 14 | 656 | unknown [Zea mays] |
| GenBank | ACN33779.1 | 0 | 15 | 694 | 1 | 680 | unknown [Zea mays] |
| GenBank | EEC67598.1 | 0 | 59 | 694 | 21 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| RefSeq | NP_001148977.1 | 0 | 15 | 694 | 1 | 680 | alpha-N-arabinofuranosidase A [Zea mays] |
| RefSeq | XP_002442705.1 | 0 | 53 | 694 | 15 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 8e-23 | 274 | 685 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 8e-23 | 274 | 685 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 8e-23 | 274 | 685 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 8e-23 | 274 | 685 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 8e-23 | 274 | 685 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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