| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G077299_T02 |
| Family | GH51 |
| Protein Properties | Length: 659 Molecular Weight: 72270.3 Isoelectric Point: 4.7848 |
| Chromosome | Chromosome/Scaffold: 4 Start: 186274255 End: 186280328 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 177 | 649 | 0 |
| LQNLASATVTVSGESNWIKVEQKLVAKGTNRTSRLQITTNKKGVVWFDQVSLMPEDTYKGHGFRTELISMILDLKPRFLRFPGGCFVEGGWLRNAFRWRE SIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLAEDLGTEPIWVFNNGVSHNDEVDTVAIAPFVKDVLDSIEFARGSANSTWGSVRAAMGHPEPFPVKYVA IGNEDCGKKFYRGNYLKFYNAIRQAYPDIQMISNCDGSSTPLDHPADLYDFHVYNDSKTLFNMKSTFDRTSRSGPKAFVSEYAVWRGDAGRGSLLASLAE AAFLTGLEKNSDIVSMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTISSSYSGSLAASAITWQDSENSFLRVKVINFGS DAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLAPRSFSSFDLAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 659 Download |
| MGITSNDAAP RAVLLRFLFL LCIGCKCLAS EVEATQTATL AVDASPQLAR KIPDTLFGIF 60 FEINHAGAGG IWAELVSNRG FEAGGLHTPS NIDPWSIIGD DSSVFVETDR TSCFSRNIVA 120 LRMEVLCDNC PTGGVGVYNP GFWGMNIEEG KVYNLVMFVK SPETTDLTVS LTSSNGLQNL 180 ASATVTVSGE SNWIKVEQKL VAKGTNRTSR LQITTNKKGV VWFDQVSLMP EDTYKGHGFR 240 TELISMILDL KPRFLRFPGG CFVEGGWLRN AFRWRESIGP WEERPGHFGD VWHYWTDDGL 300 GYYEFLQLAE DLGTEPIWVF NNGVSHNDEV DTVAIAPFVK DVLDSIEFAR GSANSTWGSV 360 RAAMGHPEPF PVKYVAIGNE DCGKKFYRGN YLKFYNAIRQ AYPDIQMISN CDGSSTPLDH 420 PADLYDFHVY NDSKTLFNMK STFDRTSRSG PKAFVSEYAV WRGDAGRGSL LASLAEAAFL 480 TGLEKNSDIV SMASYAPLFV NDNDQTWNPD AIVFNSWQHY GTPSYWMQTL FRESSGAMFH 540 PTTISSSYSG SLAASAITWQ DSENSFLRVK VINFGSDAVT LTISTSGLQA SINALGSTAT 600 VLTSADVMDE NSFSNPTKVV PVKSDLSNAA EQMQVTLAPR SFSSFDLALA QSKLVAEM* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-31 | 456 | 641 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 4.0e-35 | 238 | 643 | 482 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 4.0e-46 | 456 | 641 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27961.1 | 0 | 17 | 658 | 14 | 656 | unknown [Zea mays] |
| GenBank | ACN33779.1 | 0 | 1 | 658 | 22 | 680 | unknown [Zea mays] |
| GenBank | EEC67598.1 | 0 | 24 | 658 | 21 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| RefSeq | NP_001148977.1 | 0 | 1 | 658 | 22 | 680 | alpha-N-arabinofuranosidase A [Zea mays] |
| RefSeq | XP_002442705.1 | 0 | 18 | 658 | 15 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 8e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 8e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 8e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 8e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 8e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
