| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G078566_T01 |
| Family | CBM43 |
| Protein Properties | Length: 493 Molecular Weight: 52152.9 Isoelectric Point: 4.5792 |
| Chromosome | Chromosome/Scaffold: 5 Start: 15433112 End: 15436333 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 377 | 458 | 2.8e-24 |
| WCVVNPNAQDTSKIGDSVTYACTFSDCTSLGYGSSCNGLDAAGNASYAFNMYFQVQNQVEGSCYFQGLAVPTSQNPSTDACN | |||
| GH17 | 34 | 354 | 0 |
| LGVNWGTMATHQLPPATVVRMLEDNGIRKVKLFDADAGPMDALAGTSVEVMVAIPNNMLDMMTDYGTARDWVRQNVSRYNFDGGVNIKYVAVGNEPFLSS FNGTFLNVTLPALQNIQRALNDAGFGDTIKATVPLNADVYNSPKDNLVPSAGRFRPDIAGLMTEIVQFLNQSGAPFTVNIYPFLSLYDNDDFPLDYAFFD GTGSPVVDNGIQYTNVFDANFDTLVSALAAAGVGGLPVVVGEVGWPTDGDKHATAAFAQKFYAGLLRKLAASAGTPLRPGQYIEVYLFSLIDEDAKSVAP GNFERHWGIMRYDGQPKYAMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MAAASYDRLA VAASAVVVAA VALAVAGLPA AGALGVNWGT MATHQLPPAT VVRMLEDNGI 60 RKVKLFDADA GPMDALAGTS VEVMVAIPNN MLDMMTDYGT ARDWVRQNVS RYNFDGGVNI 120 KYVAVGNEPF LSSFNGTFLN VTLPALQNIQ RALNDAGFGD TIKATVPLNA DVYNSPKDNL 180 VPSAGRFRPD IAGLMTEIVQ FLNQSGAPFT VNIYPFLSLY DNDDFPLDYA FFDGTGSPVV 240 DNGIQYTNVF DANFDTLVSA LAAAGVGGLP VVVGEVGWPT DGDKHATAAF AQKFYAGLLR 300 KLAASAGTPL RPGQYIEVYL FSLIDEDAKS VAPGNFERHW GIMRYDGQPK YAMDLSGQGR 360 NTALVAARGV QYLPRQWCVV NPNAQDTSKI GDSVTYACTF SDCTSLGYGS SCNGLDAAGN 420 ASYAFNMYFQ VQNQVEGSCY FQGLAVPTSQ NPSTDACNFT IQITPSAAGR RRAAAATALL 480 LVVLLAAVHV AP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-16 | 376 | 446 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-30 | 376 | 459 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-59 | 37 | 354 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT42176.1 | 0 | 1 | 472 | 1 | 472 | putative 3-glucanase [Zea mays] |
| RefSeq | NP_001050810.1 | 0 | 30 | 472 | 23 | 468 | Os03g0656800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001051526.1 | 0 | 29 | 472 | 29 | 472 | Os03g0792800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147672.1 | 0 | 1 | 492 | 1 | 492 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
| RefSeq | XP_002466725.1 | 0 | 1 | 469 | 1 | 469 | hypothetical protein SORBIDRAFT_01g012900 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 34 | 356 | 2 | 316 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
| PDB | 3f55_C | 0 | 34 | 356 | 2 | 316 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
| PDB | 3f55_B | 0 | 34 | 356 | 2 | 316 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
| PDB | 3f55_A | 0 | 34 | 356 | 2 | 316 | A Chain A, Structure Of The Full-Lenght Enzyme I Of The Pts System From Staphylococcus Carnosus |
| PDB | 3em5_D | 0 | 34 | 356 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
