| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G078566_T02 |
| Family | CBM43 |
| Protein Properties | Length: 299 Molecular Weight: 31802.7 Isoelectric Point: 4.4619 |
| Chromosome | Chromosome/Scaffold: 5 Start: 15433112 End: 15436331 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 183 | 264 | 8e-25 |
| WCVVNPNAQDTSKIGDSVTYACTFSDCTSLGYGSSCNGLDAAGNASYAFNMYFQVQNQVEGSCYFQGLAVPTSQNPSTDACN | |||
| GH17 | 1 | 160 | 0 |
| MTEIVQFLNQSGAPFTVNIYPFLSLYDNDDFPLDYAFFDGTGSPVVDNGIQYTNVFDANFDTLVSALAAAGVGGLPVVVGEVGWPTDGDKHATAAFAQKF YAGLLRKLAASAGTPLRPGQYIEVYLFSLIDEDAKSVAPGNFERHWGIMRYDGQPKYAMD | |||
| Full Sequence |
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| Protein Sequence Length: 299 Download |
| MTEIVQFLNQ SGAPFTVNIY PFLSLYDNDD FPLDYAFFDG TGSPVVDNGI QYTNVFDANF 60 DTLVSALAAA GVGGLPVVVG EVGWPTDGDK HATAAFAQKF YAGLLRKLAA SAGTPLRPGQ 120 YIEVYLFSLI DEDAKSVAPG NFERHWGIMR YDGQPKYAMD LSGQGRNTAL VAARGVQYLP 180 RQWCVVNPNA QDTSKIGDSV TYACTFSDCT SLGYGSSCNG LDAAGNASYA FNMYFQVQNQ 240 VEGSCYFQGL AVPTSQNPST DACNFTIQIT PSAAGRRRAA AATALLLVVL LAAVHVAP* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-15 | 182 | 252 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-29 | 182 | 265 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-29 | 1 | 160 | 161 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT42176.1 | 0 | 1 | 278 | 195 | 472 | putative 3-glucanase [Zea mays] |
| DDBJ | BAF13440.2 | 0 | 1 | 278 | 103 | 380 | Os03g0792800 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050810.1 | 0 | 1 | 278 | 188 | 468 | Os03g0656800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147672.1 | 0 | 1 | 298 | 195 | 492 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
| RefSeq | XP_002466725.1 | 0 | 1 | 275 | 192 | 469 | hypothetical protein SORBIDRAFT_01g012900 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 1e-25 | 1 | 162 | 159 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3ur8_A | 1e-25 | 1 | 162 | 159 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3ur7_B | 1e-25 | 1 | 162 | 159 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 1e-25 | 1 | 162 | 159 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 1e-24 | 1 | 162 | 159 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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