| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G080547_T01 |
| Family | GH18 |
| Protein Properties | Length: 307 Molecular Weight: 32286.2 Isoelectric Point: 4.6049 |
| Chromosome | Chromosome/Scaffold: 7 Start: 31446367 End: 31447379 |
| Description | chitinase A |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH18 | 28 | 260 | 3.8e-30 |
| ISIYWGQNGGEGTLADTCATGNYRFVNLAFLAAFGNGQPPVLNLAGHCDPTNGGCASLSGDIKSCQSSGVKVMLSIGGGAGSYYLSSAADAKDVATYLWN NFLGGQSSSRPLGDAVLDGIDFDIEGGTNQHWDDLARYLKGYSNSGRRVYLTAAPQCPFPDSWIGGALNTGLFDYVWVQFYNNPPCQYSSGSTTNLADAW KQWLSIPAKQIFLGLPASPQAAGSGFIPADDLK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 307 Download |
| MATGSSLVPL LLLAVAVAQI VGSQAGSISI YWGQNGGEGT LADTCATGNY RFVNLAFLAA 60 FGNGQPPVLN LAGHCDPTNG GCASLSGDIK SCQSSGVKVM LSIGGGAGSY YLSSAADAKD 120 VATYLWNNFL GGQSSSRPLG DAVLDGIDFD IEGGTNQHWD DLARYLKGYS NSGRRVYLTA 180 APQCPFPDSW IGGALNTGLF DYVWVQFYNN PPCQYSSGST TNLADAWKQW LSIPAKQIFL 240 GLPASPQAAG SGFIPADDLK SQVLPLIKNS GKYGGIMLWS KYYDDQDGYS SSVKSDVMSV 300 KSDLCVT 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06546 | GH18_CTS3_chitinase | 6.0e-5 | 58 | 279 | 248 | + GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi. | ||
| cd02871 | GH18_chitinase_D-like | 1.0e-9 | 50 | 289 | 289 | + GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. | ||
| COG3469 | COG3469 | 6.0e-11 | 145 | 285 | 175 | + Chitinase [Carbohydrate transport and metabolism] | ||
| pfam00704 | Glyco_hydro_18 | 2.0e-23 | 26 | 278 | 275 | + Glycosyl hydrolases family 18. | ||
| cd02877 | GH18_hevamine_XipI_class_III | 3.0e-117 | 26 | 286 | 270 | + This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC55717.1 | 0 | 1 | 297 | 1 | 297 | putative class III acidic chitinase [Oryza sativa Japonica Group] |
| GenBank | EAZ03535.1 | 0 | 1 | 297 | 1 | 297 | hypothetical protein OsI_25670 [Oryza sativa Indica Group] |
| RefSeq | XP_002461854.1 | 0 | 1 | 297 | 1 | 297 | hypothetical protein SORBIDRAFT_02g009360 [Sorghum bicolor] |
| RefSeq | XP_002461855.1 | 0 | 1 | 297 | 1 | 297 | hypothetical protein SORBIDRAFT_02g009370 [Sorghum bicolor] |
| RefSeq | XP_002461856.1 | 0 | 1 | 297 | 1 | 297 | hypothetical protein SORBIDRAFT_02g009380 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2hvm_A | 0 | 26 | 297 | 1 | 273 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1llo_A | 0 | 26 | 297 | 1 | 273 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1hvq_A | 0 | 26 | 297 | 1 | 273 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
| PDB | 1kr0_A | 0 | 26 | 297 | 1 | 273 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
| PDB | 1kr1_A | 0 | 26 | 297 | 1 | 273 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
