| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G081790_T01 |
| Family | CBM43 |
| Protein Properties | Length: 574 Molecular Weight: 59657.6 Isoelectric Point: 3.8807 |
| Chromosome | Chromosome/Scaffold: 2 Start: 198574569 End: 198577796 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 487 | 568 | 7.9e-33 |
| WCVAKPSVPGAIVQQAMDYACGSGADCDSILPSHPCFRPDTMLAHASYAFNSYWQRTKANGATCDFGGTAMLITKDPSYDGC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 574 Download |
| MAIGHYNNSR ATARTAAMRP SVESPMYAAM EGSTGYLMTP SRLLFVFFLA LAFLAQCGGA 60 RVLRPEKMLL GHYSYSSTPA MPPYAELFAP PNPPSHPPGS PNCVLTPDTP PPPPAANTVQ 120 TPAFVYSSPP PPEVEYYYPP PYISPNPPDI SPSPPPTVAP LPPIVYPSPP EVTPSPPEVA 180 PYPSPSPPEI SPSPPEISPS PPEVAPSPPP TVTPLPPIIY PSPPGATPSP PEVAPYPSPN 240 PPEISPSPPE ISPSPPEISP SPPEIAPSPP EISPSPPSYE PTPPSIVPSP PEITPSPPEI 300 SPSPPSYEPT PPSIVPSPPE ITPSPPSYEP TPPSIVPSPP EITPNPPEIS PSPPSYEPTP 360 PTIVPSPPEY APEPPAYVPS PPEYAPEPPT YVPSPPVYAP YPPGIIPSPP EYAPEPPGIA 420 PSPPEYAPEP PGFVPSPPAV VPGPPEFAPE PPGPPAVPSP GGGFLPPVVF PPPFATPLPG 480 GTTGSEWCVA KPSVPGAIVQ QAMDYACGSG ADCDSILPSH PCFRPDTMLA HASYAFNSYW 540 QRTKANGATC DFGGTAMLIT KDPSYDGCHY ILM* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-20 | 487 | 557 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-36 | 487 | 570 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC85055.1 | 3e-21 | 44 | 328 | 10 | 382 | hypothetical protein OsI_32389 [Oryza sativa Indica Group] |
| GenBank | EEC85055.1 | 0 | 220 | 571 | 123 | 503 | hypothetical protein OsI_32389 [Oryza sativa Indica Group] |
| GenBank | EEE70222.1 | 0 | 30 | 573 | 1 | 536 | hypothetical protein OsJ_30336 [Oryza sativa Japonica Group] |
| RefSeq | XP_002312230.1 | 0 | 330 | 564 | 78 | 292 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002462835.1 | 0 | 487 | 573 | 1 | 87 | hypothetical protein SORBIDRAFT_02g032805 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.000000000000002 | 487 | 570 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
