| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G083599_T02 |
| Family | CBM43 |
| Protein Properties | Length: 526 Molecular Weight: 56134 Isoelectric Point: 8.1913 |
| Chromosome | Chromosome/Scaffold: 2 Start: 226452584 End: 226454581 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 412 | 494 | 1.2e-24 |
| WCVLNPISIAGDGRLADNVAYACSRADCTALGYGCSCGALDPRGNASYAFNAYYQAQGQVESACDFQGLAVVVDEDASQGACN | |||
| GH17 | 27 | 389 | 0 |
| LGVNWGTMSARRLPPKVMARLLTDNGFTKVKIFDADERTMKGLAGTSIETMIAVPNDMLAAVADYDRARRWVRDNVTKYTFDGGVNIKCVALGPSARVYI YAVHRHWHGPVRFSAGAETFSIVRVRPSRFVAVGNEPFLRAYNGSFDHVTVPALRNIQRALDEAGHGAAVKATVPVNADVYDSPASNPVPSAGRFRSDVA RVMADMVRFLNRSGAPLTVNIYPFLSLYGNDDFPLDYAFFDGGAGAPVVDGRAVYTNVFDANFDTLVSALKRVGLGHLPVMIGEVGWPTDGDRHATAALA ERFYAGLLQRLAARRGTPLRPGARIEAYLFGLVDEDAKSVAPGNFERHWGIFTFDGRPKFPLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 526 Download |
| MAAPRGLLAL FAVAAAATAA ATGVDALGVN WGTMSARRLP PKVMARLLTD NGFTKVKIFD 60 ADERTMKGLA GTSIETMIAV PNDMLAAVAD YDRARRWVRD NVTKYTFDGG VNIKCVALGP 120 SARVYIYAVH RHWHGPVRFS AGAETFSIVR VRPSRFVAVG NEPFLRAYNG SFDHVTVPAL 180 RNIQRALDEA GHGAAVKATV PVNADVYDSP ASNPVPSAGR FRSDVARVMA DMVRFLNRSG 240 APLTVNIYPF LSLYGNDDFP LDYAFFDGGA GAPVVDGRAV YTNVFDANFD TLVSALKRVG 300 LGHLPVMIGE VGWPTDGDRH ATAALAERFY AGLLQRLAAR RGTPLRPGAR IEAYLFGLVD 360 EDAKSVAPGN FERHWGIFTF DGRPKFPLDL RGDGRPAMPV PARGVEYLPR RWCVLNPISI 420 AGDGRLADNV AYACSRADCT ALGYGCSCGA LDPRGNASYA FNAYYQAQGQ VESACDFQGL 480 AVVVDEDASQ GACNFSVQLV GSGAPVATAV TTMAAVLVPL FLVLL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-5 | 302 | 381 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-18 | 411 | 482 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-29 | 412 | 495 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-61 | 34 | 389 | 360 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG41694.1 | 0 | 25 | 503 | 26 | 463 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
| GenBank | ACN32122.1 | 0 | 1 | 503 | 1 | 503 | unknown [Zea mays] |
| GenBank | EAY81406.1 | 0 | 30 | 496 | 32 | 461 | hypothetical protein OsI_36575 [Oryza sativa Indica Group] |
| RefSeq | NP_001140660.1 | 0 | 1 | 503 | 1 | 462 | hypothetical protein LOC100272735 [Zea mays] |
| RefSeq | XP_002449743.1 | 0 | 30 | 507 | 29 | 477 | hypothetical protein SORBIDRAFT_05g022490 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 2.00386e-43 | 27 | 390 | 2 | 315 | B Chain B, Structure Of The Fanci-Fancd2 Complex |
| PDB | 3f55_C | 2.00386e-43 | 27 | 390 | 2 | 315 | B Chain B, Structure Of The Fanci-Fancd2 Complex |
| PDB | 3f55_B | 2.00386e-43 | 27 | 390 | 2 | 315 | B Chain B, Structure Of The Fanci-Fancd2 Complex |
| PDB | 3f55_A | 2.00386e-43 | 27 | 390 | 2 | 315 | B Chain B, Structure Of The Fanci-Fancd2 Complex |
| PDB | 3em5_D | 2.00386e-43 | 27 | 390 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
