| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G090469_T01 |
| Family | CBM43 |
| Protein Properties | Length: 375 Molecular Weight: 39912.9 Isoelectric Point: 5.3222 |
| Chromosome | Chromosome/Scaffold: 4 Start: 26185531 End: 26186991 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 257 | 338 | 1.4e-25 |
| WCVLKTSANLADQKVGDSVGYACGLADCTSLGYKTSCAGLDAKGNVSYAYNMYYQTMDQDDRACDFNGLATTTSVDPSAGTC | |||
| GH17 | 5 | 235 | 0 |
| RYVAVGNEPFLETFNGTYLNTTFPAMQNVQAALAKAGLADRVKVTVPLNADVYQSPTGKPSDGDFRADIHGLMLSIVQFLAATGAPFVANVYPFISLYAD PNFPLDYAFFQGSSAPVVDGGVTYQNTFDANHDTLVAALRRNGFGNVSVVVGEVGWPTDGDASASIDYARRFNQGFLAHVASGQGTPLRPGPLDAYLFSL VDEDRKSIQPGNFERHWGLFYYDGTPKYPLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 375 Download |
| MHMHRYVAVG NEPFLETFNG TYLNTTFPAM QNVQAALAKA GLADRVKVTV PLNADVYQSP 60 TGKPSDGDFR ADIHGLMLSI VQFLAATGAP FVANVYPFIS LYADPNFPLD YAFFQGSSAP 120 VVDGGVTYQN TFDANHDTLV AALRRNGFGN VSVVVGEVGW PTDGDASASI DYARRFNQGF 180 LAHVASGQGT PLRPGPLDAY LFSLVDEDRK SIQPGNFERH WGLFYYDGTP KYPLSLGGNA 240 SSLMRPARGV KYLDKKWCVL KTSANLADQK VGDSVGYACG LADCTSLGYK TSCAGLDAKG 300 NVSYAYNMYY QTMDQDDRAC DFNGLATTTS VDPSAGTCRF IIEIDVGAAA PRSAIGFAAV 360 LAAGLAASVL SVLL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-6 | 149 | 227 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-15 | 256 | 327 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-29 | 256 | 340 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-64 | 5 | 235 | 233 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ06041.1 | 0 | 5 | 344 | 116 | 460 | hypothetical protein OsI_28283 [Oryza sativa Indica Group] |
| RefSeq | NP_001045844.1 | 0 | 5 | 349 | 119 | 461 | Os02g0139300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001061277.1 | 0 | 5 | 344 | 116 | 460 | Os08g0224500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151032.1 | 0 | 5 | 349 | 120 | 465 | glucan endo-1,3-beta-glucosidase 6 [Zea mays] |
| RefSeq | XP_002445228.1 | 0 | 5 | 350 | 121 | 467 | hypothetical protein SORBIDRAFT_07g006340 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 1e-39 | 5 | 236 | 86 | 306 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
| PDB | 1aq0_B | 1e-39 | 5 | 236 | 86 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 1e-39 | 5 | 236 | 86 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 2e-39 | 5 | 236 | 87 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 1e-38 | 5 | 236 | 87 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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