| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G100524_T01 |
| Family | CBM43 |
| Protein Properties | Length: 614 Molecular Weight: 62694 Isoelectric Point: 7.9027 |
| Chromosome | Chromosome/Scaffold: 5 Start: 1872318 End: 1875202 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 424 | 505 | 7.4e-35 |
| WCVAKSGLMDAALQDGIDYACGAGGADCSAIQPMGTCYNPNTLQAHASYAFNSYFQRNPSATSCDFGGAGMLVNVNPSSGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 614 Download |
| MAAASCPVAL AFFSSSCILL LLQTICCSGV FVELSYDSTQ VKVQVLSTSV VTDGYRVMVT 60 DKQRAYLFLK PFACRDKPCG SESTAGSFIS DVLGPDRRLN VSGIVVTATG TRQLGALLRT 120 LRSLQASLGD AGLAERVKVS PELSMSSLRV VGKDLARATK KRRWGKVLEF VRRTRSLVFV 180 RVDTEAGANG EVVAVIEEAA AQVAAVLGAD VGVVLHIKSR AVPSAAAMEK LTGRGEKRSL 240 GVLVDVSFPR RDRELGEARA TAHDEFSPVS NPATTPVSNP VTVPATNPVA NPMSPGFVTV 300 PSTNPGNGFA SNTNLPPLYP EPTTAPVTMP TPDPTTTMPP PVTVPSPFAN PVAAPTTTMP 360 GTVTNPATTP SQFPPVTNPV TTYPYPQQGG MPGTTPEVYQ PPATTTPGTA QQSAPSVTGQ 420 GQAWCVAKSG LMDAALQDGI DYACGAGGAD CSAIQPMGTC YNPNTLQAHA SYAFNSYFQR 480 NPSATSCDFG GAGMLVNVNP SSGTCVYQTS AGFGAGYSPG TTTGGGGVPS GYTPGMPGAG 540 YGAAGGGVSG TMGGGSGSTV LNANNPGGNS MYGGYDNTAG LTAGSAPLPC GGGGWAVLCL 600 VWMVTFAFVK EKV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-22 | 424 | 494 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-38 | 424 | 507 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN28117.1 | 0 | 1 | 613 | 1 | 587 | unknown [Zea mays] |
| GenBank | ACN28414.1 | 0 | 1 | 613 | 1 | 613 | unknown [Zea mays] |
| RefSeq | NP_001132166.2 | 0 | 139 | 613 | 23 | 487 | hypothetical protein LOC100193588 [Zea mays] |
| RefSeq | NP_001142611.1 | 0 | 1 | 613 | 1 | 610 | hypothetical protein LOC100274879 [Zea mays] |
| RefSeq | XP_002463588.1 | 0 | 1 | 613 | 1 | 615 | hypothetical protein SORBIDRAFT_01g002540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 8e-17 | 423 | 507 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
