| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G105791_T01 |
| Family | GT5 |
| Protein Properties | Length: 707 Molecular Weight: 76573.2 Isoelectric Point: 6.2882 |
| Chromosome | Chromosome/Scaffold: 5 Start: 206850855 End: 206855627 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 216 | 699 | 0 |
| NVVVVASECAPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEARDLGVRRRYRVAGQDSEVTYFHSYIDGVDFVFIEAPPFRHRHNDIYGGERS DVLKRIILFCKAAVEVPWYAPCGGTVYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYARSVLVIHNIAHQGRGPVDDFVNFDLPEHYIDHFKLYDNI GGEHCNVFAAGLKMADQVVTVSNGYLWELRTSEGGWGLHDIINQNDWKLQGIVNGIDMSEWNPAVDVHLHSDEYTNYTFETLDTGKRQCKAALQRQLGLQ VRDDVPLIGFIGRLDHQKGVDIIADAIHWIAGQDVQLVMLGTGRPDLEDMLRRCEAEHSDKVRAWVGFSVPLAHRITAGADVLLMPSRFEPCGLNQLYAM AYGTVPVVHAVGGLRDTVAPFDPFNDTGLGWTFDRAEANRMIDALSHCLNTFRNYKESWRGLEARGMAQDLSWDHAAVLYEDVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 707 Download |
| MAGATSSSSV SLILILVASS SPRRSRGRVG IALRSYGYSG AELRLHWARR GSSRDGPAVV 60 RAAAVPAGGE GEDAAAVGKS SSSKAVAVQG SESKTQAVYS TSPPKTATSA PKQNQSAAKQ 120 NGTVGSSSAS KSPAPAVSES KAEPSAPVTK TETDASAKVE ELKPSVDDAK PVESIGIPEP 180 VDAKVDAAAA TDAAASAADD TEDKEHGPLA GPNVMNVVVV ASECAPFCKT GGLGDVVGAL 240 PKALARRGHR VMVVIPRYGE YAEARDLGVR RRYRVAGQDS EVTYFHSYID GVDFVFIEAP 300 PFRHRHNDIY GGERSDVLKR IILFCKAAVE VPWYAPCGGT VYGDGNLVFI ANDWHTALLP 360 VYLKAYYRDN GLMQYARSVL VIHNIAHQGR GPVDDFVNFD LPEHYIDHFK LYDNIGGEHC 420 NVFAAGLKMA DQVVTVSNGY LWELRTSEGG WGLHDIINQN DWKLQGIVNG IDMSEWNPAV 480 DVHLHSDEYT NYTFETLDTG KRQCKAALQR QLGLQVRDDV PLIGFIGRLD HQKGVDIIAD 540 AIHWIAGQDV QLVMLGTGRP DLEDMLRRCE AEHSDKVRAW VGFSVPLAHR ITAGADVLLM 600 PSRFEPCGLN QLYAMAYGTV PVVHAVGGLR DTVAPFDPFN DTGLGWTFDR AEANRMIDAL 660 SHCLNTFRNY KESWRGLEAR GMAQDLSWDH AAVLYEDVLV KAKYQW* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 3.0e-85 | 215 | 695 | 501 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 7.0e-135 | 215 | 697 | 491 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 7.0e-169 | 215 | 699 | 497 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 215 | 702 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 216 | 699 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC86845.1 | 0 | 13 | 706 | 12 | 704 | starch synthase IIb precursor [Sorghum bicolor] |
| GenBank | ACN31779.1 | 0 | 1 | 706 | 1 | 698 | unknown [Zea mays] |
| RefSeq | NP_001104880.1 | 0 | 1 | 706 | 1 | 698 | starch synthase isoform zSTSII-2 [Zea mays] |
| RefSeq | NP_001106014.1 | 0 | 1 | 706 | 1 | 704 | starch synthase IIb-2 precursor [Zea mays] |
| RefSeq | XP_002452556.1 | 0 | 13 | 706 | 12 | 704 | hypothetical protein SORBIDRAFT_04g028060 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 215 | 700 | 10 | 509 | A Chain A, Structures Of Clostridium Thermocellum Cbha Fibronectin(Iii)-Like Modules |
| PDB | 3vue_A | 0 | 215 | 700 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 215 | 703 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 215 | 705 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 215 | 705 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
