| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G105791_T02 |
| Family | GT5 |
| Protein Properties | Length: 705 Molecular Weight: 76344 Isoelectric Point: 6.2882 |
| Chromosome | Chromosome/Scaffold: 5 Start: 206850628 End: 206855436 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT5 | 214 | 697 | 0 |
| NVVVVASECAPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEARDLGVRRRYRVAGQDSEVTYFHSYIDGVDFVFIEAPPFRHRHNDIYGGERS DVLKRIILFCKAAVEVPWYAPCGGTVYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYARSVLVIHNIAHQGRGPVDDFVNFDLPEHYIDHFKLYDNI GGEHCNVFAAGLKMADQVVTVSNGYLWELRTSEGGWGLHDIINQNDWKLQGIVNGIDMSEWNPAVDVHLHSDEYTNYTFETLDTGKRQCKAALQRQLGLQ VRDDVPLIGFIGRLDHQKGVDIIADAIHWIAGQDVQLVMLGTGRPDLEDMLRRCEAEHSDKVRAWVGFSVPLAHRITAGADVLLMPSRFEPCGLNQLYAM AYGTVPVVHAVGGLRDTVAPFDPFNDTGLGWTFDRAEANRMIDALSHCLNTFRNYKESWRGLEARGMAQDLSWDHAAVLYEDVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 705 Download |
| MAGATSSSSV SLILILVASS SPRRSRGRVG IALRSYGYSG AELRLHWARR GSSRDGPAVV 60 RAAAVPAGGE GEDAAAVGKS SSSKAVAVQG SESKAVYSTS PPKTATSAPK QNQSAAKQNG 120 TVGSSSASKS PAPAVSESKA EPSAPVTKTE TDASAKVEEL KPSVDDAKPV ESIGIPEPVD 180 AKVDAAAATD AAASAADDTE DKEHGPLAGP NVMNVVVVAS ECAPFCKTGG LGDVVGALPK 240 ALARRGHRVM VVIPRYGEYA EARDLGVRRR YRVAGQDSEV TYFHSYIDGV DFVFIEAPPF 300 RHRHNDIYGG ERSDVLKRII LFCKAAVEVP WYAPCGGTVY GDGNLVFIAN DWHTALLPVY 360 LKAYYRDNGL MQYARSVLVI HNIAHQGRGP VDDFVNFDLP EHYIDHFKLY DNIGGEHCNV 420 FAAGLKMADQ VVTVSNGYLW ELRTSEGGWG LHDIINQNDW KLQGIVNGID MSEWNPAVDV 480 HLHSDEYTNY TFETLDTGKR QCKAALQRQL GLQVRDDVPL IGFIGRLDHQ KGVDIIADAI 540 HWIAGQDVQL VMLGTGRPDL EDMLRRCEAE HSDKVRAWVG FSVPLAHRIT AGADVLLMPS 600 RFEPCGLNQL YAMAYGTVPV VHAVGGLRDT VAPFDPFNDT GLGWTFDRAE ANRMIDALSH 660 CLNTFRNYKE SWRGLEARGM AQDLSWDHAA VLYEDVLVKA KYQW* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 3.0e-85 | 213 | 693 | 501 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 9.0e-135 | 213 | 695 | 491 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 9.0e-169 | 213 | 697 | 497 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 213 | 700 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 214 | 697 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC86845.1 | 0 | 13 | 704 | 12 | 704 | starch synthase IIb precursor [Sorghum bicolor] |
| GenBank | ACN31779.1 | 0 | 1 | 704 | 1 | 698 | unknown [Zea mays] |
| RefSeq | NP_001104880.1 | 0 | 1 | 704 | 1 | 698 | starch synthase isoform zSTSII-2 [Zea mays] |
| RefSeq | NP_001106014.1 | 0 | 1 | 704 | 1 | 704 | starch synthase IIb-2 precursor [Zea mays] |
| RefSeq | XP_002452556.1 | 0 | 13 | 704 | 12 | 704 | hypothetical protein SORBIDRAFT_04g028060 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 213 | 698 | 10 | 509 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vue_A | 0 | 213 | 698 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 213 | 701 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 213 | 703 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 213 | 703 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
