| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G108032_T01 |
| Family | GH10 |
| Protein Properties | Length: 561 Molecular Weight: 62740.9 Isoelectric Point: 6.0579 |
| Chromosome | Chromosome/Scaffold: 1 Start: 33121698 End: 33125126 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 214 | 474 | 0 |
| QTAKDFPIGSAIASTILGNQAYQQWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWVKNLTADDLRAAVN TRIQSLMTRYRGEFAHWDVNNEMLHYNFYEQRLGPNASAEFFSVAQDADPLATLFMNEYNVIETCDDPFSTVDTYVSKLKDLRSAGAILEGIGLEGHFSK PNIPLMRAILDKLATLGLPIWFTEIDISNKFDAQTQAAYLEQVLREAYSHPAVSGVMLWTA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 561 Download |
| MKMHRFALRG LGFLVLWMLH CGSELAAAVP PDGWYDYSAY TDCRGQPEPA LYNGGILKFG 60 SSGGDPDGYR TTETGVFSPA FVVYNLNKTT MYTFSCWVKL EGAYSALITA RLAPDNTGAR 120 CIATVVARSD CWAFVKGGFV LDWPTQTSVI FFQNADKTPM KITVASGSLQ PFTTDQWAMH 180 QQDTIRKRRK RVATIHVADP QGARVVGASV SVQQTAKDFP IGSAIASTIL GNQAYQQWFV 240 DRFNAAVFED ELKWYSTEPM SGQLRFDVPD QMLAFVRSHR VMVRGHNIFW ENQDATPRWV 300 KNLTADDLRA AVNTRIQSLM TRYRGEFAHW DVNNEMLHYN FYEQRLGPNA SAEFFSVAQD 360 ADPLATLFMN EYNVIETCDD PFSTVDTYVS KLKDLRSAGA ILEGIGLEGH FSKPNIPLMR 420 AILDKLATLG LPIWFTEIDI SNKFDAQTQA AYLEQVLREA YSHPAVSGVM LWTALHPSGC 480 YQMCLTDWNL SNLPTGDVVD RLLNEWRTLQ AAGQTDAHGA YSFTGYLGEY VLTVSYNNRT 540 TQSTFSLSPG DETRHINVQM * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13620 | CarboxypepD_reg | 0.003 | 494 | 560 | 74 | + Carboxypeptidase regulatory-like domain. | ||
| COG3693 | XynA | 7.0e-40 | 203 | 472 | 289 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-63 | 216 | 472 | 273 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 3.0e-78 | 252 | 499 | 269 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94920.1 | 0 | 3 | 560 | 1 | 563 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABF94921.1 | 0 | 3 | 560 | 1 | 558 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC74851.1 | 0 | 2 | 560 | 159 | 717 | hypothetical protein OsI_10717 [Oryza sativa Indica Group] |
| RefSeq | NP_001140909.1 | 0 | 1 | 560 | 1 | 560 | hypothetical protein LOC100272986 [Zea mays] |
| RefSeq | XP_002468186.1 | 0 | 1 | 560 | 1 | 560 | hypothetical protein SORBIDRAFT_01g041310 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-30 | 221 | 472 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3msg_B | 6e-29 | 216 | 441 | 13 | 245 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3msg_A | 6e-29 | 216 | 441 | 13 | 245 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3msd_B | 6e-29 | 216 | 441 | 13 | 245 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3msd_A | 6e-29 | 216 | 441 | 13 | 245 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
