| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G108032_T02 |
| Family | GH10 |
| Protein Properties | Length: 471 Molecular Weight: 52902.8 Isoelectric Point: 5.9668 |
| Chromosome | Chromosome/Scaffold: 1 Start: 33121698 End: 33125078 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH10 | 124 | 384 | 0 |
| QTAKDFPIGSAIASTILGNQAYQQWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWVKNLTADDLRAAVN TRIQSLMTRYRGEFAHWDVNNEMLHYNFYEQRLGPNASAEFFSVAQDADPLATLFMNEYNVIETCDDPFSTVDTYVSKLKDLRSAGAILEGIGLEGHFSK PNIPLMRAILDKLATLGLPIWFTEIDISNKFDAQTQAAYLEQVLREAYSHPAVSGVMLWTA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 471 Download |
| MYTFSCWVKL EGAYSALITA RLAPDNTGAR CIATVVARSD CWAFVKGGFV LDWPTQTSVI 60 FFQNADKTPM KITVASGSLQ PFTTDQWAMH QQDTIRKRRK RVATIHVADP QGARVVGASV 120 SVQQTAKDFP IGSAIASTIL GNQAYQQWFV DRFNAAVFED ELKWYSTEPM SGQLRFDVPD 180 QMLAFVRSHR VMVRGHNIFW ENQDATPRWV KNLTADDLRA AVNTRIQSLM TRYRGEFAHW 240 DVNNEMLHYN FYEQRLGPNA SAEFFSVAQD ADPLATLFMN EYNVIETCDD PFSTVDTYVS 300 KLKDLRSAGA ILEGIGLEGH FSKPNIPLMR AILDKLATLG LPIWFTEIDI SNKFDAQTQA 360 AYLEQVLREA YSHPAVSGVM LWTALHPSGC YQMCLTDWNL SNLPTGDVVD RLLNEWRTLQ 420 AAGQTDAHGA YSFTGYLGEY VLTVSYNNRT TQSTFSLSPG DETRHINVQM * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13620 | CarboxypepD_reg | 0.003 | 404 | 470 | 74 | + Carboxypeptidase regulatory-like domain. | ||
| COG3693 | XynA | 3.0e-40 | 113 | 382 | 289 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 4.0e-64 | 126 | 382 | 273 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 6.0e-79 | 162 | 409 | 269 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94921.1 | 0 | 1 | 470 | 89 | 558 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABF94922.1 | 0 | 1 | 470 | 1 | 470 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC74851.1 | 0 | 1 | 470 | 248 | 717 | hypothetical protein OsI_10717 [Oryza sativa Indica Group] |
| RefSeq | NP_001140909.1 | 0 | 1 | 470 | 91 | 560 | hypothetical protein LOC100272986 [Zea mays] |
| RefSeq | XP_002468186.1 | 0 | 1 | 470 | 91 | 560 | hypothetical protein SORBIDRAFT_01g041310 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 1e-30 | 131 | 382 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3msg_B | 2e-29 | 126 | 351 | 13 | 245 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3msg_A | 2e-29 | 126 | 351 | 13 | 245 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3msd_B | 2e-29 | 126 | 351 | 13 | 245 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3msd_A | 2e-29 | 126 | 351 | 13 | 245 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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