| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G111324_T02 |
| Family | CBM43 |
| Protein Properties | Length: 470 Molecular Weight: 50106.7 Isoelectric Point: 5.4856 |
| Chromosome | Chromosome/Scaffold: 1 Start: 27626310 End: 27631083 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 332 | 413 | 4.7e-30 |
| CVAREGADPKMLQAALDWACGPGKVDCSVLMQGQPCYDPDTVDAHATYAFNAYYHGMGMGSGTCYFSGVAVVTTTDPSHGSC | |||
| GH17 | 4 | 313 | 0 |
| VPAPTQITTLLRSQNIRHVRLYDADPAMLAALSNTGIRVIVSVPNEQLLAIGNSNATAANWVARNVAAHFPAVNITAIAVGSEVLSAQPSAAPLLMPAMR YLQNALVAAALDRYIKVSTPHSSSIILDSFPPSQAFFNRSLDGVLVPMLRFLQSTGSPLMLNVYPYYDYMRSNGVIPLDYALFRPLPPNKEAVDANTLLH YTNVFDAVVDAAYFAMAYLNVTNVPVMVTETGWPHKGDSSSEPDATSDNADTYNSNLIRHVMNSTGTPKHPGVAVPTYVYELYDEDTRPGSTSEKYWGLF DMNGVPAYTL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 470 Download |
| MSSVPAPTQI TTLLRSQNIR HVRLYDADPA MLAALSNTGI RVIVSVPNEQ LLAIGNSNAT 60 AANWVARNVA AHFPAVNITA IAVGSEVLSA QPSAAPLLMP AMRYLQNALV AAALDRYIKV 120 STPHSSSIIL DSFPPSQAFF NRSLDGVLVP MLRFLQSTGS PLMLNVYPYY DYMRSNGVIP 180 LDYALFRPLP PNKEAVDANT LLHYTNVFDA VVDAAYFAMA YLNVTNVPVM VTETGWPHKG 240 DSSSEPDATS DNADTYNSNL IRHVMNSTGT PKHPGVAVPT YVYELYDEDT RPGSTSEKYW 300 GLFDMNGVPA YTLHLTGSGV LLANDTTNQT YCVAREGADP KMLQAALDWA CGPGKVDCSV 360 LMQGQPCYDP DTVDAHATYA FNAYYHGMGM GSGTCYFSGV AVVTTTDPSH GSCVYAGKNG 420 TSLMNGTSLA PSSNSTEGGS GAHRAFGDVS SLVRIVSTAL LFSVVLLLL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-8 | 225 | 303 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-17 | 330 | 402 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-39 | 330 | 415 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-80 | 5 | 313 | 309 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF80565.1 | 0 | 1 | 469 | 1 | 469 | unknown [Zea mays] |
| GenBank | ACN30650.1 | 0 | 1 | 456 | 34 | 489 | unknown [Zea mays] |
| RefSeq | NP_001130376.1 | 0 | 1 | 469 | 34 | 502 | hypothetical protein LOC100191471 [Zea mays] |
| RefSeq | NP_001150141.1 | 0 | 1 | 456 | 34 | 489 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
| RefSeq | XP_002468258.1 | 0 | 1 | 459 | 34 | 492 | hypothetical protein SORBIDRAFT_01g042560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 2 | 315 | 10 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 2 | 316 | 12 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 2 | 316 | 12 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 2 | 316 | 12 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 2 | 316 | 12 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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