| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G114140_T01 |
| Family | CBM43 |
| Protein Properties | Length: 585 Molecular Weight: 61866.8 Isoelectric Point: 8.1396 |
| Chromosome | Chromosome/Scaffold: 7 Start: 154898661 End: 154901107 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 478 | 560 | 7.6e-31 |
| WCVANAAAGDARLLAALNYACANGADCGAIQPGGACFEPNTVVAHASYAFNSYYQRKGRGSGTCDFAGAGSVVYHAPKIIGKC | |||
| CBM43 | 392 | 472 | 1.2e-31 |
| WCVANASAGDARLQAALEYACGHGADCGAIQPGAPCFEPDTRLAHASYAFNSYYQRNGRAKAACDFDGAAYVVYHEPAGTC | |||
| GH17 | 28 | 383 | 0 |
| VGVSYGRLGNDLPGTASVVKLLKKSGITSVRLYDANSKVLKALANTGITVMVMLPNDKLAAAAADPSSARRWVRRNVAAYYPATQIHAVAVGNEVFEEAK NLTGQLVPAMSNVHDALVKLGLDGAVKVSTPIAFTALQESWPPSAGRFRDDIARSVMKPMIDFLERTGSYLTVNAYPFFAYAEEPDKISLDYALGNSNAT GVRDPVTGLVYHSLLDAQLDATYFAMEKLGTSRSSARGPKSVAPAAHVSESGWPSGGKPKRGGRPRPRPRGGGRRLELEQAGGEAASVANAQAYNNYLIK RVLSGDTGTPYHPDADMDVYIFSLFNENQKGDGADDVEQHFGLFYPNRTKVYEFDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 585 Download |
| MALTNVFVVL LSTALAVLPF SPADAGVVGV SYGRLGNDLP GTASVVKLLK KSGITSVRLY 60 DANSKVLKAL ANTGITVMVM LPNDKLAAAA ADPSSARRWV RRNVAAYYPA TQIHAVAVGN 120 EVFEEAKNLT GQLVPAMSNV HDALVKLGLD GAVKVSTPIA FTALQESWPP SAGRFRDDIA 180 RSVMKPMIDF LERTGSYLTV NAYPFFAYAE EPDKISLDYA LGNSNATGVR DPVTGLVYHS 240 LLDAQLDATY FAMEKLGTSR SSARGPKSVA PAAHVSESGW PSGGKPKRGG RPRPRPRGGG 300 RRLELEQAGG EAASVANAQA YNNYLIKRVL SGDTGTPYHP DADMDVYIFS LFNENQKGDG 360 ADDVEQHFGL FYPNRTKVYE FDFRGGALVA SWCVANASAG DARLQAALEY ACGHGADCGA 420 IQPGAPCFEP DTRLAHASYA FNSYYQRNGR AKAACDFDGA AYVVYHEPAG TCDPNVSWCV 480 ANAAAGDARL LAALNYACAN GADCGAIQPG GACFEPNTVV AHASYAFNSY YQRKGRGSGT 540 CDFAGAGSVV YHAPKIIGKC VLPSKAWIQE TTTVKSRGFK TSSV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-19 | 477 | 548 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam07983 | X8 | 1.0e-24 | 391 | 462 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-30 | 477 | 561 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| smart00768 | X8 | 5.0e-38 | 391 | 472 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-100 | 28 | 383 | 356 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27897.1 | 0 | 137 | 584 | 1 | 448 | unknown [Zea mays] |
| RefSeq | NP_001151472.1 | 0 | 1 | 584 | 1 | 584 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
| RefSeq | XP_002462967.1 | 0 | 1 | 478 | 1 | 484 | hypothetical protein SORBIDRAFT_02g035480 [Sorghum bicolor] |
| RefSeq | XP_002462967.1 | 0 | 477 | 579 | 395 | 497 | hypothetical protein SORBIDRAFT_02g035480 [Sorghum bicolor] |
| RefSeq | XP_002462968.1 | 0 | 20 | 578 | 21 | 577 | hypothetical protein SORBIDRAFT_02g035490 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 28 | 383 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 28 | 383 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 28 | 383 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 28 | 383 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 0 | 28 | 383 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
