| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G114427_T01 |
| Family | AA7 |
| Protein Properties | Length: 540 Molecular Weight: 58806 Isoelectric Point: 8.0924 |
| Chromosome | Chromosome/Scaffold: 4 Start: 230020398 End: 230022222 |
| Description | cytokinin oxidase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA7 | 58 | 257 | 7.7e-31 |
| TDFGQMVRAAPEAVFHPATPADIAALVRFSATSAAPFPVAPRGQGHSWRGQALAPGGVVVDMGSLGRGPRINVSAATGAEPFVDAGGEQLWVDVLRATLR HGLAPRVWTDYLRLTVGGTLSNAGIGGQAFRHGPQIANVHELDVVTGTGEMVTCSMDVNSDLFMAALGGLGQFGVITRARIRLEPAPKRVRWVRLAYTDV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MARRTRFVAV AALLASFLSV AAGHPRPLPA AGLPGDLFGL GIASRIRTDS NSTAKAATDF 60 GQMVRAAPEA VFHPATPADI AALVRFSATS AAPFPVAPRG QGHSWRGQAL APGGVVVDMG 120 SLGRGPRINV SAATGAEPFV DAGGEQLWVD VLRATLRHGL APRVWTDYLR LTVGGTLSNA 180 GIGGQAFRHG PQIANVHELD VVTGTGEMVT CSMDVNSDLF MAALGGLGQF GVITRARIRL 240 EPAPKRVRWV RLAYTDVATF TKDQEFLISN RTSQVGFDYV EGQVQLNRSL VEGPKSTPFF 300 SGADLARLAG LASRTGPTAI YYIEGAMYYT EDTAISVDKK MKALLDQLSF EPGFPFTKDV 360 TFVQFLDRVR EEERVLRSAG AWEVPHPWLN LFVPRSRILD FDDGVFKALL KDANPAGIIL 420 MYPMNKDRWD DRMTAMTPAT DDDDNVFYAV SFLWSALSAD DVPQLERWNK AVLDFCDRSG 480 IECKQYLPHY TSQDGWRRHF GAKWSRIAEL KARYDPRALL SPGQRIFPVP VESSGIASA* 540 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01679 | bact_FAD_ox | 1.0e-8 | 64 | 251 | 195 | + FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. | ||
| COG0277 | GlcD | 3.0e-26 | 43 | 524 | 490 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| pfam01565 | FAD_binding_4 | 5.0e-27 | 68 | 212 | 146 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
| pfam09265 | Cytokin-bind | 2.0e-131 | 244 | 527 | 287 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
| PLN02441 | PLN02441 | 0 | 24 | 534 | 514 | + cytokinin dehydrogenase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0009690 | cytokinin metabolic process |
| GO:0016491 | oxidoreductase activity |
| GO:0019139 | cytokinin dehydrogenase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD17196.1 | 0 | 13 | 527 | 11 | 516 | putative cytokinin dehydrogenase 1 precursor [Oryza sativa Japonica Group] |
| DDBJ | BAD17197.1 | 0 | 13 | 530 | 11 | 516 | putative cytokinin dehydrogenase 1 precursor [Oryza sativa Japonica Group] |
| GenBank | EAY85042.1 | 0 | 13 | 530 | 11 | 516 | hypothetical protein OsI_06399 [Oryza sativa Indica Group] |
| RefSeq | XP_002451780.1 | 0 | 4 | 539 | 3 | 534 | hypothetical protein SORBIDRAFT_04g007740 [Sorghum bicolor] |
| RefSeq | XP_002453544.1 | 0 | 5 | 539 | 4 | 537 | hypothetical protein SORBIDRAFT_04g007730 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1w1s_A | 0 | 7 | 527 | 6 | 533 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
| PDB | 1w1r_A | 0 | 7 | 527 | 6 | 533 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
| PDB | 1w1q_A | 0 | 7 | 527 | 6 | 533 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
| PDB | 1w1o_A | 0 | 7 | 527 | 6 | 533 | A Chain A, Native Cytokinin Dehydrogenase |
| PDB | 3s1e_A | 0 | 20 | 527 | 1 | 515 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
