| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G120779_T01 |
| Family | CE8 |
| Protein Properties | Length: 396 Molecular Weight: 43201 Isoelectric Point: 6.3946 |
| Chromosome | Chromosome/Scaffold: 8 Start: 175092256 End: 175093999 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 98 | 389 | 0 |
| VDANPAFGDFTTIQAAVDSLPDMNLVRVVIRVNPGTYTEKVSISAMRAFITLEGAGADSTIVQWGDTADSPTGAKGRPLGTFNSASFAVNAQYFLARNIT FKNTSPVPRPGATGKQAVALRVSADNAAFVGCSFLGAQDTLYDHSGRHYYKECYIQGSVDFIFGNALSLYEDCHVHAIALDYGALTAQNRQSMLEDTGFS FVNCRVTGSGALYLGRAWGTFSRVVFAYTYMDDIIIPKGWYNWGDPNRELTVFYGQYKCTGPGATYAGRVAWSHELTDDEARPFVSLNFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 396 Download |
| MPLYSVSVFF LPVIELLFLL KFSAAPPPAS FNSGMGMPRA RSLACIAVAA IALLAPTRGA 60 EMVERQFVEW VRYMGGLRHS TFQQHALDRA SPSYSLVVDA NPAFGDFTTI QAAVDSLPDM 120 NLVRVVIRVN PGTYTEKVSI SAMRAFITLE GAGADSTIVQ WGDTADSPTG AKGRPLGTFN 180 SASFAVNAQY FLARNITFKN TSPVPRPGAT GKQAVALRVS ADNAAFVGCS FLGAQDTLYD 240 HSGRHYYKEC YIQGSVDFIF GNALSLYEDC HVHAIALDYG ALTAQNRQSM LEDTGFSFVN 300 CRVTGSGALY LGRAWGTFSR VVFAYTYMDD IIIPKGWYNW GDPNRELTVF YGQYKCTGPG 360 ATYAGRVAWS HELTDDEARP FVSLNFIDGN EWIML* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 6.0e-117 | 105 | 393 | 289 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 3.0e-117 | 104 | 394 | 293 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 1.0e-117 | 87 | 393 | 315 | + probable pectinesterase | ||
| PLN02634 | PLN02634 | 2.0e-120 | 96 | 393 | 299 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 0 | 60 | 395 | 336 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN26093.1 | 0 | 35 | 395 | 1 | 399 | unknown [Zea mays] |
| GenBank | ACR36293.1 | 0 | 35 | 395 | 1 | 391 | unknown [Zea mays] |
| RefSeq | NP_001044216.1 | 0 | 61 | 395 | 51 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440102.1 | 0 | 61 | 395 | 73 | 406 | hypothetical protein SORBIDRAFT_09g026060 [Sorghum bicolor] |
| RefSeq | XP_002458469.1 | 0 | 35 | 395 | 1 | 402 | hypothetical protein SORBIDRAFT_03g034250 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 97 | 393 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 98 | 393 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 2e-26 | 94 | 372 | 31 | 347 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.000000000000001 | 93 | 382 | 3 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.000000000000001 | 93 | 382 | 3 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
