| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G121278_T01 |
| Family | CE8 |
| Protein Properties | Length: 338 Molecular Weight: 36592.1 Isoelectric Point: 5.8006 |
| Chromosome | Chromosome/Scaffold: 8 Start: 37475893 End: 37477339 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 44 | 325 | 0 |
| VFVNRNGGADFTSVQDAVDSVPFGNGQWIRVHVAAGVYNEKVIVPQNKSFILLEGEGWQQTSIEWADHAGGDSTTAASPTFAAYSDDFMARDITFKNTYN GDGRIAPAVAALAAGDRSSFYRCGFVSVQDTLSDLEGRHYYEGCYIEGAMDFIFGNGQSIFQGCEIWTARTPVWPGFITAQGRMSEADSSGFVFKGCTVR GVTPAYLGRAWRRYARVIFFQTDMSGVVVSQGWDAWSYKGTEGTLTMVEEGCTGQGSNRTGRVPWTKDLSGDDLAKFVDLSY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 338 Download |
| MRLLRLGPPL VRTALAVLVA VLASMAAVPR ARCQAARAVV ARSVFVNRNG GADFTSVQDA 60 VDSVPFGNGQ WIRVHVAAGV YNEKVIVPQN KSFILLEGEG WQQTSIEWAD HAGGDSTTAA 120 SPTFAAYSDD FMARDITFKN TYNGDGRIAP AVAALAAGDR SSFYRCGFVS VQDTLSDLEG 180 RHYYEGCYIE GAMDFIFGNG QSIFQGCEIW TARTPVWPGF ITAQGRMSEA DSSGFVFKGC 240 TVRGVTPAYL GRAWRRYARV IFFQTDMSGV VVSQGWDAWS YKGTEGTLTM VEEGCTGQGS 300 NRTGRVPWTK DLSGDDLAKF VDLSYVSADG WLDAQPR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 1.0e-81 | 49 | 332 | 284 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-82 | 53 | 332 | 289 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 2.0e-89 | 49 | 334 | 296 | + Probable pectinesterase | ||
| PLN02176 | PLN02176 | 4.0e-94 | 49 | 336 | 297 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 2.0e-114 | 49 | 336 | 297 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40838.1 | 0 | 42 | 336 | 43 | 341 | unnamed protein product [Vitis vinifera] |
| GenBank | EAY73651.1 | 0 | 38 | 337 | 36 | 335 | hypothetical protein OsI_01540 [Oryza sativa Indica Group] |
| GenBank | EAZ11567.1 | 0 | 33 | 337 | 28 | 284 | hypothetical protein OsJ_01434 [Oryza sativa Japonica Group] |
| RefSeq | XP_002263748.1 | 0 | 16 | 336 | 10 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002455508.1 | 0 | 1 | 337 | 1 | 338 | hypothetical protein SORBIDRAFT_03g012410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1.96182e-44 | 38 | 334 | 3 | 310 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-33 | 39 | 308 | 1 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.000000000000002 | 37 | 286 | 5 | 289 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.000000000000002 | 37 | 286 | 5 | 289 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.000000000000002 | 37 | 286 | 5 | 289 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
