| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G121612_T01 |
| Family | CBM53 |
| Protein Properties | Length: 1192 Molecular Weight: 133976 Isoelectric Point: 5.3685 |
| Chromosome | Chromosome/Scaffold: 10 Start: 142920487 End: 142929525 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM53 | 309 | 392 | 1e-31 |
| SMIDLYLNRSMSALASESDVFVKGAFNGWRWNRFTETMHRSELRGDWWCCKLYIPKQAYRLDFVFFNGDTVYENNNHNDFFLEI | |||
| CBM53 | 645 | 733 | 1.5e-34 |
| GTTVDVLYNPSNTVLNGKSEVWFRGSFNRWTHPSGPLPPQKMVKAENSSHLRTTVSVPLDAYMMDFVFSESEEGGRYDNRNGMDYHIPV | |||
| CBM53 | 483 | 573 | 8.2e-35 |
| GDRVRLYYNRSSRSLMHNTEIWMHGGYNNWIDGLSIAERLVKSHEKEGDWWYVEVTLPERALVLDWVFADGPPGNAWNYDNNGRQDFHAIV | |||
| GT5 | 744 | 1186 | 0 |
| HIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHKVEVILPKYDCLILSSVKDLHYQQSFASGGTEVKVWFGKVEDLPVYFLEPQNGMFWVGCVYGKNDE SRFGFFCHSALEFLLQKGSSPDIIHCHDWSSAPVAWLYKEQYALNGMGNGRIVFTIHNLEFGAHHIGKAMAHCDKATTVSDTYSKEVAGHGAIAPHYYKF HGIRNGIDPDIWDPYTDRFIPVHYTSENVLEGKSAAKKALQQMLGLQQTDSPVVGIITRLTVQKGIHLIKHAMHRALERNGQVVLLGSAPDHRIQGDFTN LASKLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSIPIVRKTGGLYDTVFDVDDDKDRAQAQGLEPNGFSFEGADSSGVD YALDRAITAFYDARDWFNSLSKRVMEQDWSWNRPALDYMELYH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1192 Download |
| MEMNLRAESP LCSRGRPALV VRPAAAATGL ALSVVRCSRF TRGGLVRCMV SSSDYPKRNP 60 RRASTSKSKG VASGGYASRP TAESSTKKIE QSRNNEGDFS RANGSLYGEA AEQASTAEES 120 SQVYMTGDIL SGAERDGAGT EEEADQNQSS ALPSASMDDD SIDRQLDEYR GKISALVSSK 180 PEPSSLASVA GQNESVGGFH GQHEPITGSE EHGSSIVDAP TKGRLFAEAV VGHKDFTESA 240 AGKASSENEE GQAVSLEDDV GISTDADEEL PVSEDDPEVL LRRLQELADE NYSTGNNCFV 300 FPEVVKADSM IDLYLNRSMS ALASESDVFV KGAFNGWRWN RFTETMHRSE LRGDWWCCKL 360 YIPKQAYRLD FVFFNGDTVY ENNNHNDFFL EIESDIDEHS FEDFLVEEKR KELERLAAEE 420 AERKRQAEER HRREEERAAM EADRAQARSE VEMKKEKLRQ MLSSASRYAE NLWYIEPNTY 480 RGGDRVRLYY NRSSRSLMHN TEIWMHGGYN NWIDGLSIAE RLVKSHEKEG DWWYVEVTLP 540 ERALVLDWVF ADGPPGNAWN YDNNGRQDFH AIVPNNISDD IFWVEEEHRI FTRLQQERRE 600 RESAERIKAE RSAKMKAEMK EKTMRAFLLS QKHIVYTEPL EVRAGTTVDV LYNPSNTVLN 660 GKSEVWFRGS FNRWTHPSGP LPPQKMVKAE NSSHLRTTVS VPLDAYMMDF VFSESEEGGR 720 YDNRNGMDYH IPVSDSVARE PPMHIVHIAV EMAPIAKVGG LGDVVTSLSR AVQDLGHKVE 780 VILPKYDCLI LSSVKDLHYQ QSFASGGTEV KVWFGKVEDL PVYFLEPQNG MFWVGCVYGK 840 NDESRFGFFC HSALEFLLQK GSSPDIIHCH DWSSAPVAWL YKEQYALNGM GNGRIVFTIH 900 NLEFGAHHIG KAMAHCDKAT TVSDTYSKEV AGHGAIAPHY YKFHGIRNGI DPDIWDPYTD 960 RFIPVHYTSE NVLEGKSAAK KALQQMLGLQ QTDSPVVGII TRLTVQKGIH LIKHAMHRAL 1020 ERNGQVVLLG SAPDHRIQGD FTNLASKLHG EYHGRVKLCL TYDEPLSHLI YAGADFILVP 1080 SIFEPCGLTQ LIAMRYGSIP IVRKTGGLYD TVFDVDDDKD RAQAQGLEPN GFSFEGADSS 1140 GVDYALDRAI TAFYDARDWF NSLSKRVMEQ DWSWNRPALD YMELYHSARK N* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 6.0e-18 | 63 | 167 | 118 | + synthase/transferase | ||
| TIGR02095 | glgA | 7.0e-147 | 743 | 1188 | 490 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 1.0e-158 | 743 | 1191 | 487 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 5.0e-164 | 744 | 1187 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 245 | 1190 | 947 | + synthase/transferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC86847.1 | 0 | 1 | 1191 | 1 | 1191 | starch synthase IIIb precursor [Sorghum bicolor] |
| GenBank | ACY56216.1 | 0 | 1 | 1191 | 1 | 1216 | soluble starch synthase III-1 [Oryza sativa Japonica Group] |
| RefSeq | NP_001106015.1 | 0 | 1 | 1191 | 1 | 1191 | starch synthase IIIb-1 precursor [Zea mays] |
| RefSeq | NP_001106016.1 | 0 | 1 | 1191 | 1 | 1188 | starch synthase IIIb-2 precursor [Zea mays] |
| RefSeq | XP_002448557.1 | 0 | 1 | 1191 | 1 | 1173 | hypothetical protein SORBIDRAFT_06g029050 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rzv_B | 0 | 743 | 1185 | 1 | 472 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 743 | 1185 | 1 | 472 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0 | 743 | 1185 | 1 | 472 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 1rzu_A | 0 | 743 | 1185 | 1 | 472 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3d1j_A | 0 | 743 | 1186 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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