| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G126988_T01 |
| Family | GT5 |
| Protein Properties | Length: 775 Molecular Weight: 86943.9 Isoelectric Point: 5.8126 |
| Chromosome | Chromosome/Scaffold: 5 Start: 33050572 End: 33066028 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 284 | 767 | 0 |
| NVILVAAECAPWSKTGGLGDVAGALPKALAKRGHRVMVVVPKYGDYEEPQEIGEPRSYHVAGQDMEVKYYHAYIDGVDFVFIDNPVFHYVQSEIYGGDQT DIWKRMVLLCKAAVEVQWYVPCGGFCYGDGNLVFIANDWHTALLPVYLKAYYRDNGFMPYARSVLVIHNIAHQGRGPIDDFRYLDLPGHYMDQFKLYDPF GGDHLNIFAAGIRAADRLLTVSHGYAWELKTPDGGWGLHSIINENDWKFQGIVNGIDTADWNPRHDVHLQSDGYTNYSLETVQTGKAQCKEALQKELGLP VRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSVRLAHRMTAGADILLMPSRFEPCGLNQLYAM MYGTVPVVHAVGGLRDTVQHYNPYEEVGVGWTFEKAEANRMIDALGHCLNTYRNYWSSWEGIQRRGMMQDLSWDNAAKLYEEVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 775 Download |
| MPAPMAASTF PVAPLHAPPL VRPRVVPPSP TFGCCCRCSA PRGGLTLRPQ ACAPRRRCNP 60 AIRPVRFCAE VGSVWPVVLT RSIRRGFQKG ISVARVDDNA AGQVSLGDDN EDLDHITNET 120 LRTTIRKSKE VLARHKIIMN QISEKKQLIS TILDSSIHNE QEPLSGQSDG SLSNLNAIAK 180 GTEIGYDHQT YHNRSLQQYE FDTTYGESIY DQNTYYESSE DDGTDFSENY QYKSFPRATR 240 SVYELEEDNG MKQGYVVQLS QASGHEQSVN EGTNDNASEV DVMNVILVAA ECAPWSKTGG 300 LGDVAGALPK ALAKRGHRVM VVVPKYGDYE EPQEIGEPRS YHVAGQDMEV KYYHAYIDGV 360 DFVFIDNPVF HYVQSEIYGG DQTDIWKRMV LLCKAAVEVQ WYVPCGGFCY GDGNLVFIAN 420 DWHTALLPVY LKAYYRDNGF MPYARSVLVI HNIAHQGRGP IDDFRYLDLP GHYMDQFKLY 480 DPFGGDHLNI FAAGIRAADR LLTVSHGYAW ELKTPDGGWG LHSIINENDW KFQGIVNGID 540 TADWNPRHDV HLQSDGYTNY SLETVQTGKA QCKEALQKEL GLPVRGDVPV IAFIGRLDHQ 600 KGVDLIAEAM PWIAGQDVQL IMLGTGRQDL EDTLRRLESQ HYDRVRGWVG FSVRLAHRMT 660 AGADILLMPS RFEPCGLNQL YAMMYGTVPV VHAVGGLRDT VQHYNPYEEV GVGWTFEKAE 720 ANRMIDALGH CLNTYRNYWS SWEGIQRRGM MQDLSWDNAA KLYEEVLLAA KYQW* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 2.0e-85 | 283 | 771 | 512 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 7.0e-136 | 283 | 772 | 503 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 1.0e-169 | 283 | 767 | 500 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 283 | 770 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 284 | 767 | 493 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABY27639.1 | 0 | 5 | 774 | 1 | 742 | starch synthase IIc precursor [Triticum aestivum] |
| GenBank | ABY27640.1 | 0 | 36 | 774 | 30 | 765 | starch synthase IIc precursor [Sorghum bicolor] |
| GenBank | ACY56170.1 | 0 | 47 | 774 | 64 | 749 | soluble starch synthase II-1 [Oryza sativa Japonica Group] |
| GenBank | ACY56176.1 | 0 | 47 | 774 | 64 | 749 | soluble starch synthase II-1 [Oryza sativa Indica Group] |
| RefSeq | NP_001108120.1 | 0 | 1 | 774 | 1 | 775 | starch synthase IIc precursor [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 283 | 768 | 10 | 509 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3vue_A | 0 | 283 | 768 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 1rzv_B | 0 | 283 | 766 | 1 | 471 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 283 | 766 | 1 | 471 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0 | 283 | 766 | 1 | 471 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| Hydropathy |
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