| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G127309_T02 |
| Family | CBM43 |
| Protein Properties | Length: 459 Molecular Weight: 47683.2 Isoelectric Point: 7.5928 |
| Chromosome | Chromosome/Scaffold: 1 Start: 295348578 End: 295351065 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 316 | 394 | 5.3e-33 |
| WCVAKSGLMDTALQDGIDYACGVGGADCSAIQPMGACYNPNTLQAHASYAFNSYFQRNPSAASCDFGGAGMLVNVNPSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 459 Download |
| MASACPLTLR FLFSCILLQT ICCSGVSVEL SYDSAQVKAL SSSAVTEYRV TVTDKRRAYY 60 VFQKPFVCRD KPCRSSEPIA AAGSFVNEAI AGAKRHEPEA NGELAVVAEI EGAGVVPHVK 120 SRVAPSAVAM SSGREKRLLG VLVDVPSPRR ELGEARATAR DEFSPVSNPA TTPVSNPVTV 180 PATNPMPPGF VTVPSTNPGN GIATNPNLPP LYPEPTTPGT MPMPDPTTTP VTVPPAFTNP 240 VAAPNTMPGT AVTNPATTPT QFPGSSPVTN PVTTYPYPQQ GGMPATTPPA VYQPPATAMP 300 GTVQPGAPTV AGQAAWCVAK SGLMDTALQD GIDYACGVGG ADCSAIQPMG ACYNPNTLQA 360 HASYAFNSYF QRNPSAASCD FGGAGMLVNV NPSEPPTILK SATHCFGTSN TRIGFLPTNL 420 IYLQAQELAC TRHQQGKSGS MIHPSVHLKI PSCHHPSA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-21 | 316 | 386 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-34 | 316 | 393 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84664.1 | 0 | 1 | 394 | 1 | 394 | unknown [Zea mays] |
| RefSeq | NP_001132166.2 | 0 | 1 | 393 | 5 | 390 | hypothetical protein LOC100193588 [Zea mays] |
| RefSeq | NP_001142611.1 | 0 | 26 | 393 | 137 | 498 | hypothetical protein LOC100274879 [Zea mays] |
| RefSeq | XP_002463588.1 | 1e-30 | 1 | 95 | 1 | 94 | hypothetical protein SORBIDRAFT_01g002540 [Sorghum bicolor] |
| RefSeq | XP_002463588.1 | 0 | 37 | 393 | 132 | 509 | hypothetical protein SORBIDRAFT_01g002540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 4e-16 | 308 | 393 | 5 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
