| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G127714_T02 |
| Family | GH33 |
| Protein Properties | Length: 309 Molecular Weight: 34443.9 Isoelectric Point: 5.381 |
| Chromosome | Chromosome/Scaffold: 2 Start: 203058550 End: 203064372 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH33 | 21 | 301 | 6.6e-25 |
| EFTFQAHDRPFNNCHASTIVEVEKEIFLVSYFGGSIEGAPDVKIWTQRYSDGYWHPPVVADEENATAMWNPVLFQLPSHELLLFYKIGEHPQNWSGAMKR SLNGGMSWLEREQLPPGILGPIKNKPFLLDDGRLLCGTSVESWNSWGAWLEVTEDAGRTWSKYGPIFIQGEKLGVIQPVPYQTTNGSIRMLLRSHQTIGS VCMADSYDGGLRWSFARKSVLPNPNSGIDGIKMKDGRVALAYNTVSRGTLKVAVSTDDGLSWQEVVTLENAEGWEFSYPAV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 309 Download |
| MYNMNTSSIN AASSWSIMKE EFTFQAHDRP FNNCHASTIV EVEKEIFLVS YFGGSIEGAP 60 DVKIWTQRYS DGYWHPPVVA DEENATAMWN PVLFQLPSHE LLLFYKIGEH PQNWSGAMKR 120 SLNGGMSWLE REQLPPGILG PIKNKPFLLD DGRLLCGTSV ESWNSWGAWL EVTEDAGRTW 180 SKYGPIFIQG EKLGVIQPVP YQTTNGSIRM LLRSHQTIGS VCMADSYDGG LRWSFARKSV 240 LPNPNSGIDG IKMKDGRVAL AYNTVSRGTL KVAVSTDDGL SWQEVVTLEN AEGWEFSYPA 300 VIQTQGRP* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.009 | 52 | 294 | 283 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 6.0e-18 | 30 | 302 | 327 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 3.0e-84 | 47 | 306 | 275 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG41080.1 | 0 | 4 | 308 | 1 | 305 | hypothetical protein [Zea mays] |
| GenBank | EEC82140.1 | 0 | 2 | 304 | 93 | 395 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| GenBank | EEC82140.1 | 0 | 41 | 304 | 421 | 658 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| RefSeq | NP_001059779.1 | 0 | 2 | 304 | 93 | 395 | Os07g0516000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131252.1 | 0 | 1 | 308 | 1 | 308 | hypothetical protein LOC100192565 [Zea mays] |
| Hydropathy |
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