| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G130043_T01 |
| Family | GT5 |
| Protein Properties | Length: 702 Molecular Weight: 78610.5 Isoelectric Point: 6.7139 |
| Chromosome | Chromosome/Scaffold: 4 Start: 172606253 End: 172677186 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 224 | 685 | 0 |
| HIVHICSEMYPVASCGPLSAYVASLSCEIQKKANLVEVILPKYTSINLDGIHGLRRSEAEYESYFGGLWHKNKIWTGTSSGVGLVIIEPSQLSYFSRDML RGYPDDFERFSYFSRASLDYIVKSGKRPDIIHIHNWETAIVAPLFWEIFAHQGLGNTRILLTCQDLNSECLEEPNKLEMCGLDPRKLHRPDRLQDTNKTH LVNILKGGIVYSNKVVLMSSTHSKDALIQGSRHELQSTLAAHREKILVASYGLDGELWDPFKDIYLPRRYSANDIEGKSICRQALRRRLRFNGDSSIIVG CICDDNSDVHSLKEAVHVALHRNTQVIIMETLGSVVNSILQALKGEIKGDKIAFVEAYDEALAHLIYAGSDIILCSSFQDPSLQIAMKAMKYGSVPVQLN FSSDESRESKGHECRNTVMSQYIISTYGDLSLSQALDDFKNDPSHWDRQIKDGMARGSSWDA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 702 Download |
| METPRLVVGA ASRAPPPAPR SQRRRILRPC GGAHCSPSAR AAPPVLLTRC SSYSSSREGN 60 GDSHGKARRE SSGSVRLDVE ADSDQVPSLA DEQREGDITE LFNLAQRNIL YINKQRLIAM 120 EEMKKLHDEN NLLLEEIQGL ETEMQGIPLE AAQSSSFSEL LLRIDTMVIS GMISMTEASD 180 LREKLVTNRS IIQSTFCDIH HKPNTELLSE LQLFLRKPIE KPLHIVHICS EMYPVASCGP 240 LSAYVASLSC EIQKKANLVE VILPKYTSIN LDGIHGLRRS EAEYESYFGG LWHKNKIWTG 300 TSSGVGLVII EPSQLSYFSR DMLRGYPDDF ERFSYFSRAS LDYIVKSGKR PDIIHIHNWE 360 TAIVAPLFWE IFAHQGLGNT RILLTCQDLN SECLEEPNKL EMCGLDPRKL HRPDRLQDTN 420 KTHLVNILKG GIVYSNKVVL MSSTHSKDAL IQGSRHELQS TLAAHREKIL VASYGLDGEL 480 WDPFKDIYLP RRYSANDIEG KSICRQALRR RLRFNGDSSI IVGCICDDNS DVHSLKEAVH 540 VALHRNTQVI IMETLGSVVN SILQALKGEI KGDKIAFVEA YDEALAHLIY AGSDIILCSS 600 FQDPSLQIAM KAMKYGSVPV QLNFSSDESR ESKGHECRNT VMSQYIISTY GDLSLSQALD 660 DFKNDPSHWD RQIKDGMARG SSWDAKCYSL HWEAYSSITK L* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 0.008 | 52 | 144 | 93 | + transferase, transferring glycosyl groups | ||
| PRK00654 | glgA | 6.0e-70 | 223 | 688 | 503 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-73 | 224 | 688 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 2.0e-80 | 223 | 698 | 499 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 1.0e-105 | 112 | 685 | 595 | + transferase, transferring glycosyl groups | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK98690.1 | 0 | 37 | 701 | 41 | 720 | AC069158_2 Putative starch synthase [Oryza sativa Japonica Group] |
| GenBank | ACC78131.1 | 0 | 37 | 701 | 41 | 700 | starch synthase V precursor [Oryza sativa] |
| GenBank | EEC74203.1 | 0 | 37 | 701 | 39 | 697 | hypothetical protein OsI_09361 [Oryza sativa Indica Group] |
| RefSeq | NP_001048453.1 | 0 | 302 | 701 | 4 | 403 | Os02g0807100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001123603.1 | 0 | 1 | 701 | 1 | 701 | starch synthase V [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3guh_A | 3e-20 | 223 | 688 | 1 | 469 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 2r4u_A | 3e-20 | 223 | 688 | 1 | 469 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 2r4t_A | 3e-20 | 223 | 688 | 1 | 469 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 2qzs_A | 3e-20 | 223 | 688 | 1 | 469 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3cx4_A | 7e-20 | 223 | 688 | 1 | 469 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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