| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G138888_T01 |
| Family | GT30 |
| Protein Properties | Length: 451 Molecular Weight: 49867.4 Isoelectric Point: 9.6635 |
| Chromosome | Chromosome/Scaffold: 3 Start: 177535181 End: 177544703 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT30 | 43 | 224 | 0 |
| RWPERLGRPSAARPRPGSPLVWFHAVSLGEGMAALPIVRHCVRLRPGLPVLFTTTTLSSSEVIMDLLPDGVIYQFAPLDCPTAIDSFIGYWKPSLVLLLE SELWPNLIMSAAAKGIAVALLNARISLKSFNHWSMPLMFPLVSLMLSKLSLVVPLSTIQAVRFQLLHTPPGIIHFAGDLKYA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 451 Download |
| MRPTRAASRG GWALYELYRT TSRVAAPAVL LWRRLQGLEH PTRWPERLGR PSAARPRPGS 60 PLVWFHAVSL GEGMAALPIV RHCVRLRPGL PVLFTTTTLS SSEVIMDLLP DGVIYQFAPL 120 DCPTAIDSFI GYWKPSLVLL LESELWPNLI MSAAAKGIAV ALLNARISLK SFNHWSMPLM 180 FPLVSLMLSK LSLVVPLSTI QAVRFQLLHT PPGIIHFAGD LKYAVGDVNT GENQVKEIKD 240 LQRQFSNRPL WMAASIHRGE EEVILRIHEE LVNVYPVLLL ILVPRHPEDC KNISLALKKQ 300 KVNFVLRSTR EVVSSITRVY MVDTLGELRM LYRVTPIAVV GGSFLPGLAG HNFSEAAAAG 360 CAVMTGPHVG HFYHMLVEMW QINPLAVKQV SGEFELLQTL KELLGDASTL GARQRAAKDA 420 FSIMSDGVVN RVWDLVCRLG IDSQTNTLSS * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04413 | Glycos_transf_N | 2.0e-43 | 40 | 225 | 187 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. | ||
| COG1519 | KdtA | 4.0e-89 | 17 | 436 | 429 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK05749 | PRK05749 | 7.0e-99 | 17 | 436 | 427 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN31913.1 | 0 | 1 | 450 | 1 | 450 | unknown [Zea mays] |
| GenBank | EEC71834.1 | 0 | 1 | 450 | 1 | 453 | hypothetical protein OsI_04493 [Oryza sativa Indica Group] |
| RefSeq | XP_002322900.1 | 0 | 8 | 436 | 5 | 433 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002458792.1 | 0 | 1 | 450 | 1 | 453 | hypothetical protein SORBIDRAFT_03g040370 [Sorghum bicolor] |
| RefSeq | XP_002528642.1 | 0 | 6 | 434 | 5 | 433 | 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xcu_D | 3e-22 | 63 | 416 | 43 | 356 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xcu_C | 3e-22 | 63 | 416 | 43 | 356 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xcu_B | 3e-22 | 63 | 416 | 43 | 356 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xcu_A | 3e-22 | 63 | 416 | 43 | 356 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xci_D | 3e-22 | 63 | 416 | 43 | 356 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| KDO transfer to lipid IVA I | KDOTRANS-RXN | EC-2.4.99.12 | lipid IVA 3-deoxy-D-manno-octulosonic acid transferase |
| KDO transfer to lipid IVA I | KDOTRANS2-RXN | EC-2.4.99.13 | (KDO)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase |
| Hydropathy |
|---|
 |