| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G139691_T01 |
| Family | GT47 |
| Protein Properties | Length: 498 Molecular Weight: 55920.3 Isoelectric Point: 9.4192 |
| Chromosome | Chromosome/Scaffold: 3 Start: 187021027 End: 187026350 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 111 | 421 | 0 |
| LRVYVYEMPSKFTYDLLRLFRDSYRDTDNLTSNGSPVHRLIEQHSIDYWLWADLIALDSQRLLKSVIRVQQQEEADIFYVPFFTTISYFLLEKQECKALY REALKWVTDQPAWQRSEGRDHVIPVHHPWSFKSVRRSVKKAIWLLPDMDSTGNWYKPGQVYLEKDVILPYVPNVDLCDHKCVLETQSKRSILLFFRGRLK RNAGGKIRSKLVEELKSAKDIVIEEGSTGAQGKAAAQDGMRKSFFCLSPAGDTPSSARLFDAIVSGCIPVIISDELELPFEGILDYREIALFVSASDAVQ PGWLLKYLRGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 498 Download |
| MAGKQFPSPA HSRSASASSR RLLAAVAASL ILLTASYFLL LSPSSHRSAP AILANPSATT 60 SFLASLDRFL SDPHPSASAA APVELDAAIR VQEDARLYGD PTWPAPAAGL LRVYVYEMPS 120 KFTYDLLRLF RDSYRDTDNL TSNGSPVHRL IEQHSIDYWL WADLIALDSQ RLLKSVIRVQ 180 QQEEADIFYV PFFTTISYFL LEKQECKALY REALKWVTDQ PAWQRSEGRD HVIPVHHPWS 240 FKSVRRSVKK AIWLLPDMDS TGNWYKPGQV YLEKDVILPY VPNVDLCDHK CVLETQSKRS 300 ILLFFRGRLK RNAGGKIRSK LVEELKSAKD IVIEEGSTGA QGKAAAQDGM RKSFFCLSPA 360 GDTPSSARLF DAIVSGCIPV IISDELELPF EGILDYREIA LFVSASDAVQ PGWLLKYLRG 420 INAKRIREIQ SNLVKYSRHF LYSSPAQPLG PEDLTWRMIA GKLVNIKLQI RRSQRLVKES 480 RSICTCECRV GNTTRML* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-71 | 111 | 421 | 319 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN25797.1 | 0 | 118 | 497 | 1 | 380 | unknown [Zea mays] |
| GenBank | EAY76230.1 | 0 | 48 | 485 | 45 | 488 | hypothetical protein OsI_04166 [Oryza sativa Indica Group] |
| RefSeq | NP_001044591.1 | 0 | 48 | 485 | 44 | 487 | Os01g0811400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001141657.1 | 0 | 1 | 497 | 1 | 497 | hypothetical protein LOC100273782 [Zea mays] |
| RefSeq | XP_002458661.1 | 0 | 1 | 497 | 1 | 499 | hypothetical protein SORBIDRAFT_03g037670 [Sorghum bicolor] |
