| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G141214_T01 |
| Family | AA3 |
| Protein Properties | Length: 389 Molecular Weight: 41987.8 Isoelectric Point: 9.2923 |
| Chromosome | Chromosome/Scaffold: 1 Start: 217209891 End: 217212299 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 39 | 337 | 0 |
| QSEAYDYIIVGGGTAGCPLAATLSHKYKVLLLERGGSPYGNRNITLLENFHICLADVSPQSPSQAFISTDGVINARANVLGGGTCINAGFYSRAKPSFVQ QAGWDAELVNQSYPWVEERIVHWPKVAPWQAALRDGLLEAGVSPYNGYSYDHLYGTKVGGTIFDDTGRRHTAADLLAAGNASNLRVLLHATVDKIVLARK HGGGRKQPRATGVRFRDENGAHHQAFLTRKRGSDVIVSAGAIGSPQLLLLSGIGPRGQLSRHNVSLVHANEHVGEGMSDNPMNSIFVPMKSPTKQSLIE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 389 Download |
| MDLLSRGAVF KALVFLCFIR SSQGGDLNLP PLVKASRFQS EAYDYIIVGG GTAGCPLAAT 60 LSHKYKVLLL ERGGSPYGNR NITLLENFHI CLADVSPQSP SQAFISTDGV INARANVLGG 120 GTCINAGFYS RAKPSFVQQA GWDAELVNQS YPWVEERIVH WPKVAPWQAA LRDGLLEAGV 180 SPYNGYSYDH LYGTKVGGTI FDDTGRRHTA ADLLAAGNAS NLRVLLHATV DKIVLARKHG 240 GGRKQPRATG VRFRDENGAH HQAFLTRKRG SDVIVSAGAI GSPQLLLLSG IGPRGQLSRH 300 NVSLVHANEH VGEGMSDNPM NSIFVPMKSP TKQSLIETVG ITDAGVFIEA SSGFSQSDDS 360 IHCHHGIMSA EVGRRRRLLL FFIFYMHI* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 2.0e-8 | 40 | 77 | 40 | + choline dehydrogenase; Validated | ||
| PRK02106 | PRK02106 | 4.0e-19 | 199 | 317 | 121 | + choline dehydrogenase; Validated | ||
| TIGR01810 | betA | 1.0e-20 | 44 | 318 | 312 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| COG2303 | BetA | 3.0e-30 | 43 | 319 | 319 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 0 | 5 | 373 | 386 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ08804.1 | 0 | 9 | 374 | 10 | 380 | hypothetical protein OsI_31066 [Oryza sativa Indica Group] |
| RefSeq | NP_001061757.1 | 0 | 1 | 374 | 1 | 379 | Os08g0401500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001062996.1 | 0 | 9 | 374 | 10 | 380 | Os09g0363900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147913.1 | 0 | 1 | 374 | 1 | 375 | protein HOTHEAD [Zea mays] |
| RefSeq | XP_002445466.1 | 0 | 1 | 374 | 1 | 379 | hypothetical protein SORBIDRAFT_07g019920 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gdp_B | 0 | 42 | 343 | 26 | 323 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3gdp_A | 0 | 42 | 343 | 26 | 323 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3gdn_B | 0 | 42 | 343 | 26 | 323 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 3gdn_A | 0 | 42 | 343 | 26 | 323 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ju2_B | 0 | 42 | 343 | 26 | 323 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
