| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G142214_T01 |
| Family | GT47 |
| Protein Properties | Length: 538 Molecular Weight: 59928.8 Isoelectric Point: 9.8414 |
| Chromosome | Chromosome/Scaffold: 2 Start: 228516304 End: 228518309 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 90 | 439 | 0 |
| CRGRYIYMHELPRRFNADIVHTCRNRKTEDHWGDICASLSNAGLGRPLDGDSVITGESGWYGTHQFALDAIFHNRMVQYECLTNHSAVASAVFVPFYAGF DFARYHWGYDNATRDAASVDLTEWLMARPEWRRMGGRDHFLVAGRTGWDFRRISNLGADWGNDLLVIPGARNMSVLVLESTLKRGTDFSVPYPTYFHPRS DADVLRWQDRVRGQRRTWLMAFVGAPRPDVQMSIRVRDHVIAQCKASGACAMLSCARTPSSRQCHRPANIMRLFQKATFCLQPPGDSCTRRSVFDSMVAG CIPVFFHTGSAYKQYPWHLPKDDHLRYSVYIPTADVRRRNVSIEAVLRAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 538 Download |
| MQLSVANSIV QLLVKSGRKP GGSARSRRAV EVKGIEIKAA AAAKAKVLPP LRILAALAIA 60 AWTLFLYVHF SVITGTVEVM SNGEDLADPC RGRYIYMHEL PRRFNADIVH TCRNRKTEDH 120 WGDICASLSN AGLGRPLDGD SVITGESGWY GTHQFALDAI FHNRMVQYEC LTNHSAVASA 180 VFVPFYAGFD FARYHWGYDN ATRDAASVDL TEWLMARPEW RRMGGRDHFL VAGRTGWDFR 240 RISNLGADWG NDLLVIPGAR NMSVLVLEST LKRGTDFSVP YPTYFHPRSD ADVLRWQDRV 300 RGQRRTWLMA FVGAPRPDVQ MSIRVRDHVI AQCKASGACA MLSCARTPSS RQCHRPANIM 360 RLFQKATFCL QPPGDSCTRR SVFDSMVAGC IPVFFHTGSA YKQYPWHLPK DDHLRYSVYI 420 PTADVRRRNV SIEAVLRAIP PATVARMQEE VIRLIPSLLY ADPRSKLKTL KDAVAVAVDG 480 ILDTVARIKN GEEVNCGGPV DKDPPNLFAS TASRFFPEGY VQAARGRSWT KGMQSRI* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-66 | 89 | 439 | 361 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001048943.1 | 0 | 1 | 491 | 1 | 481 | Os03g0144300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002465869.1 | 0 | 1 | 533 | 7 | 534 | hypothetical protein SORBIDRAFT_01g047310 [Sorghum bicolor] |
| RefSeq | XP_002468519.1 | 0 | 43 | 523 | 4 | 484 | hypothetical protein SORBIDRAFT_01g047290 [Sorghum bicolor] |
| RefSeq | XP_002468520.1 | 0 | 32 | 525 | 1 | 480 | hypothetical protein SORBIDRAFT_01g047300 [Sorghum bicolor] |
| RefSeq | XP_002468521.1 | 0 | 16 | 523 | 4 | 505 | hypothetical protein SORBIDRAFT_01g047315 [Sorghum bicolor] |
