| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G142584_T01 |
| Family | AA1 |
| Protein Properties | Length: 560 Molecular Weight: 61919.5 Isoelectric Point: 8.1988 |
| Chromosome | Chromosome/Scaffold: 8 Start: 119369178 End: 119371841 |
| Description | SKU5 similar 13 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 48 | 510 | 0 |
| QKVILINGEFPGPRINCSSNNNIVVNVFNQLDHPLLFTWNGMQHRKNSWMDGMPGTQCPIAPNTNFTYKWQPKDQIGSFFYFPSIGMQRAAGGYGAISVV SRLLIPVPFDQPPPESDHAVLIGDWYTKDHEVLARQLDAGKSVGRPAGVLINGKGGKDLEAAAPMLTFEAGKTYRLRVCNTGIKASLNFRIQGHDMKLVE LEGSHTLQDVYDSLDVHVGHCLSVLVDADQAPGDYYMVASTRFIHDAKSASAVIRYAGSSGAPPAPNMTEPPAGWAWSINQARSFRWNLTASAARPNPQG SYHYGQINITRTIKVMVSRGHIDGKLRYGFNGISHRDTETPLKLAEYFNVTDGVFSYNQMGDVPPAVNGPLHVIPNVITAEFRTFIEIVFENPEKSIDSL HLDGYAFFGVGMGPGTWSPEMRKTYNLLDTVSRHTIQVYPRSWTAIMLTFDNAGMWSVRSNVW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 560 Download |
| MATSTMRVAA GVLLVVSALA TLARAEDPYL FFEWKVTYGT RSLLGVPQKV ILINGEFPGP 60 RINCSSNNNI VVNVFNQLDH PLLFTWNGMQ HRKNSWMDGM PGTQCPIAPN TNFTYKWQPK 120 DQIGSFFYFP SIGMQRAAGG YGAISVVSRL LIPVPFDQPP PESDHAVLIG DWYTKDHEVL 180 ARQLDAGKSV GRPAGVLING KGGKDLEAAA PMLTFEAGKT YRLRVCNTGI KASLNFRIQG 240 HDMKLVELEG SHTLQDVYDS LDVHVGHCLS VLVDADQAPG DYYMVASTRF IHDAKSASAV 300 IRYAGSSGAP PAPNMTEPPA GWAWSINQAR SFRWNLTASA ARPNPQGSYH YGQINITRTI 360 KVMVSRGHID GKLRYGFNGI SHRDTETPLK LAEYFNVTDG VFSYNQMGDV PPAVNGPLHV 420 IPNVITAEFR TFIEIVFENP EKSIDSLHLD GYAFFGVGMG PGTWSPEMRK TYNLLDTVSR 480 HTIQVYPRSW TAIMLTFDNA GMWSVRSNVW ERYYLGEQFY ISVISPARSL RDEYNMPDNA 540 LRCGKVVGLP LPPSYAPAR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02168 | PLN02168 | 2.0e-178 | 28 | 546 | 533 | + copper ion binding / pectinesterase | ||
| PLN02354 | PLN02354 | 0 | 26 | 557 | 532 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 26 | 548 | 527 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 26 | 548 | 523 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 26 | 545 | 523 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF86554.2 | 0 | 1 | 559 | 1 | 559 | unknown [Zea mays] |
| GenBank | ACN26659.1 | 0 | 11 | 559 | 13 | 559 | unknown [Zea mays] |
| RefSeq | NP_001151772.1 | 0 | 1 | 559 | 1 | 559 | pollen-specific protein NTP303 [Zea mays] |
| RefSeq | NP_001151961.1 | 0 | 11 | 559 | 13 | 559 | pollen-specific protein NTP303 [Zea mays] |
| RefSeq | XP_002441281.1 | 0 | 24 | 559 | 26 | 559 | hypothetical protein SORBIDRAFT_09g023770 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 32 | 544 | 6 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asq_A | 0 | 32 | 544 | 6 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_B | 0 | 32 | 544 | 6 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_A | 0 | 32 | 544 | 6 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1aso_B | 0 | 32 | 544 | 6 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
