| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G145651_T01 |
| Family | CBM43 |
| Protein Properties | Length: 342 Molecular Weight: 34284.6 Isoelectric Point: 4.2202 |
| Chromosome | Chromosome/Scaffold: 2 Start: 144982955 End: 144985696 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 166 | 248 | 1.9e-33 |
| WCVAKAAGSSEAALQNALDYACGIGGVDCSAIQPSGSCYYPNTIQAHASYAFNTYYQRNPVSSSCDFGGTAMLVTANPSSGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 342 Download |
| MAMPAALLLF LLVLSAFEAG ELPRCSAAAA GKPAVLVHDD LSPVQDTSPI ATVPSTNPSP 60 AIITVPSTNP TITIPSLNPL PTPITAPSTN IPSPSTMLPP VPVIYPLPTP STSSPPAVPV 120 TNPAVTTPST SPPSTPTPFN NPPLLNPTPT PAPTVTAPAA SGREVWCVAK AAGSSEAALQ 180 NALDYACGIG GVDCSAIQPS GSCYYPNTIQ AHASYAFNTY YQRNPVSSSC DFGGTAMLVT 240 ANPSSGSCVF ASSLPSSSSS TVGYDPASTA TPSSPSSGSD SGAPVLNASG AGSSESSDFG 300 FDIPGAVNLG SGWRSVSPPN WPWAALVWIL VALCVHKEGM V* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-20 | 166 | 237 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-37 | 166 | 250 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36168.1 | 0 | 1 | 341 | 1 | 341 | unknown [Zea mays] |
| GenBank | EAZ17118.1 | 0 | 22 | 328 | 29 | 319 | hypothetical protein OsJ_32617 [Oryza sativa Japonica Group] |
| GenBank | EEC73314.1 | 0 | 24 | 337 | 24 | 323 | hypothetical protein OsI_07501 [Oryza sativa Indica Group] |
| RefSeq | XP_002450265.1 | 0 | 1 | 319 | 73 | 396 | hypothetical protein SORBIDRAFT_05g002745 [Sorghum bicolor] |
| RefSeq | XP_002512573.1 | 0 | 36 | 335 | 102 | 402 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-18 | 150 | 250 | 2 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
