| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G147221_T01 |
| Family | GH5 |
| Protein Properties | Length: 540 Molecular Weight: 59071.5 Isoelectric Point: 6.629 |
| Chromosome | Chromosome/Scaffold: 8 Start: 94750778 End: 94753384 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 251 | 524 | 4.1002e-42 |
| EHWSTYIVEDDFKFFASSGLTAVRIPVGWWIASDPSPPAPYVGGSLQALDNAFRWAEKHELGVIVDLHAAPGSQNPWEHSSSRDGTQEWGTTDASIAQTV QVIDFLASRYATSPRLLAVELLNEPLAPGATLDSLTRYYRDGYAAVRKHAPAAYVVMSNRLSSGNSTELLWFAGRGFPGAVVDVHYYTVFNSLFGNFTAQ QNIDFVRTNFSGELAAVTTRDGPLTFVGEWVAEWKVPNATKEEYQKYAAAQMNVYGQATFGWAYWTAKNANNHW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MGFRGGLRPP VTRVCFVLLC LCASLSEAKR TPQPAPTTGK KQQPPAASSS QQSPAVSYPA 60 LPVRAVCLGG WLVTEGWILP SLFDGIPNKD LLDGTQLQFK SALRKTYLTA DNGGGGAVVA 120 NRTQASDWET FKLWRLNDTT FNFRTSGNQF VGIGASDGII VATATTPGLP ETFQIVRCPF 180 DKNRVRIKAA NGYFVQAIAT GEVIADYGEP TRWSDFDASV FLMTTVGQQL QGEYQLCNGY 240 GADKAAPLLR EHWSTYIVED DFKFFASSGL TAVRIPVGWW IASDPSPPAP YVGGSLQALD 300 NAFRWAEKHE LGVIVDLHAA PGSQNPWEHS SSRDGTQEWG TTDASIAQTV QVIDFLASRY 360 ATSPRLLAVE LLNEPLAPGA TLDSLTRYYR DGYAAVRKHA PAAYVVMSNR LSSGNSTELL 420 WFAGRGFPGA VVDVHYYTVF NSLFGNFTAQ QNIDFVRTNF SGELAAVTTR DGPLTFVGEW 480 VAEWKVPNAT KEEYQKYAAA QMNVYGQATF GWAYWTAKNA NNHWDLEWMI RNGYISLKG* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.004 | 138 | 214 | 79 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 0.0002 | 95 | 217 | 123 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 1.0e-15 | 237 | 521 | 297 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 5.0e-28 | 214 | 534 | 373 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE62967.1 | 0 | 61 | 538 | 43 | 545 | hypothetical protein OsJ_17774 [Oryza sativa Japonica Group] |
| RefSeq | NP_001055011.1 | 0 | 61 | 538 | 43 | 524 | Os05g0244500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001150774.1 | 0 | 1 | 539 | 1 | 539 | cellulase containing protein [Zea mays] |
| RefSeq | XP_002440848.1 | 0 | 1 | 539 | 1 | 539 | hypothetical protein SORBIDRAFT_09g008170 [Sorghum bicolor] |
| RefSeq | XP_002464704.1 | 0 | 59 | 538 | 39 | 515 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 4e-32 | 233 | 533 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 6e-32 | 233 | 533 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 6e-32 | 233 | 533 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
