| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G149932_T01 |
| Family | GT47 |
| Protein Properties | Length: 459 Molecular Weight: 52154.9 Isoelectric Point: 9.5741 |
| Chromosome | Chromosome/Scaffold: 10 Start: 147538239 End: 147540924 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT47 | 41 | 383 | 0 |
| RRLRVYVADLPRAFNYGLLDRYWSLRAADSRIQASSDPDHPPPHDHPPYPENPLIKQYSAEYWLLASLRAAATAPAAVRVVADWREADVVFVPFFATLSA EMELGWGTKGAFRKKDGNEDYRRQREVVDRVTSHPAWRRSSGRDHIFVLTDPVAMWHVRAEIAPAILLVVDFGGWYKVDSKSSSKNSSRVIQHTQVSLLK DVIVPYTHLLPTLLLSENKDRRTLLYFKGAKHRHRGGLVREKLWDLLGNEPDVIMEEGFPNATGREQSIKGLRTSEFCLHPAGDTPTSCRLFDAIASLCI PVIVSDEVELPFEGIIDYTEISIFVSVSNAMRPKWLTSYLRNI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 459 Download |
| MKRLPILVVP VLLLLLSISF FLFRPTTPPV LSSRQAFEPD RRLRVYVADL PRAFNYGLLD 60 RYWSLRAADS RIQASSDPDH PPPHDHPPYP ENPLIKQYSA EYWLLASLRA AATAPAAVRV 120 VADWREADVV FVPFFATLSA EMELGWGTKG AFRKKDGNED YRRQREVVDR VTSHPAWRRS 180 SGRDHIFVLT DPVAMWHVRA EIAPAILLVV DFGGWYKVDS KSSSKNSSRV IQHTQVSLLK 240 DVIVPYTHLL PTLLLSENKD RRTLLYFKGA KHRHRGGLVR EKLWDLLGNE PDVIMEEGFP 300 NATGREQSIK GLRTSEFCLH PAGDTPTSCR LFDAIASLCI PVIVSDEVEL PFEGIIDYTE 360 ISIFVSVSNA MRPKWLTSYL RNISKQQKDE FRRNLARVQP IFEYDTSYSS SRGSTSIDGA 420 VSHIWKKIQQ KLPMIQEAII RDKRKPDGVS IPLRCHCT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 8.0e-61 | 39 | 383 | 357 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAE02830.1 | 0 | 24 | 458 | 23 | 464 | OSJNBa0043A12.35 [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC78225.1 | 0 | 24 | 458 | 23 | 452 | hypothetical protein OsI_17865 [Oryza sativa Indica Group] |
| RefSeq | NP_001137073.1 | 0 | 24 | 458 | 24 | 458 | hypothetical protein LOC100217246 [Zea mays] |
| RefSeq | XP_002448739.1 | 0 | 24 | 458 | 24 | 456 | hypothetical protein SORBIDRAFT_06g032380 [Sorghum bicolor] |
| RefSeq | XP_002533317.1 | 0 | 43 | 458 | 55 | 478 | catalytic, putative [Ricinus communis] |
