| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G152029_T01 |
| Family | GT47 |
| Protein Properties | Length: 387 Molecular Weight: 43398 Isoelectric Point: 6.6433 |
| Chromosome | Chromosome/Scaffold: 5 Start: 6036207 End: 6049105 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 20 | 314 | 0 |
| RLKVYVHDLPSKYNKKLVKKDPRCLNHMFAAEIFMHRLLLSSAVRTFNPEEADWFYTPVYATCDLTPSGLPLPFKSPRMMLSAIELIATNWPYWNRSEGA DHFFVTPHDFGACFHYQDEKAIGRGILPLLQHATLVQTFGQKNHVCLKGGSITIPPFAPPQKMQAHLIPADTPRSIFVYFRGLFYDTSNDPEGGYYARGA RASVWENFKNNPLFDISTDHPSTYYEDMERSVFCLCPLGWAPWSPRLVEAVVFGCIPLIIADIVLPFADAIPWEEIGVFVAEEDVPKLDSILTSI | |||
| Full Sequence |
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| Protein Sequence Length: 387 Download |
| MLYKVEGSAG DVLEDNPVGR LKVYVHDLPS KYNKKLVKKD PRCLNHMFAA EIFMHRLLLS 60 SAVRTFNPEE ADWFYTPVYA TCDLTPSGLP LPFKSPRMML SAIELIATNW PYWNRSEGAD 120 HFFVTPHDFG ACFHYQDEKA IGRGILPLLQ HATLVQTFGQ KNHVCLKGGS ITIPPFAPPQ 180 KMQAHLIPAD TPRSIFVYFR GLFYDTSNDP EGGYYARGAR ASVWENFKNN PLFDISTDHP 240 STYYEDMERS VFCLCPLGWA PWSPRLVEAV VFGCIPLIIA DIVLPFADAI PWEEIGVFVA 300 EEDVPKLDSI LTSIPTDVIL RKQRLLANPS MKQAMLFPQP AQAGDAFHQI LNGLARKLPH 360 GDSVFLKPGE RVLNWTAGPP GDLKPW* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 9.0e-82 | 20 | 314 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF82849.1 | 0 | 4 | 386 | 34 | 418 | unknown [Zea mays] |
| GenBank | ACF86410.1 | 0 | 4 | 386 | 34 | 418 | unknown [Zea mays] |
| RefSeq | NP_001149319.1 | 0 | 4 | 386 | 38 | 421 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | NP_001150738.1 | 0 | 4 | 386 | 32 | 415 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | XP_002459017.1 | 0 | 4 | 386 | 37 | 420 | hypothetical protein SORBIDRAFT_03g044530 [Sorghum bicolor] |
| Hydropathy |
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