| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G152638_T01 |
| Family | CBM43 |
| Protein Properties | Length: 493 Molecular Weight: 52516.8 Isoelectric Point: 5.7486 |
| Chromosome | Chromosome/Scaffold: 7 Start: 74885294 End: 74888153 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 368 | 447 | 1.9e-27 |
| WCVANPARDLDSVSDHMKLACSMADCTTLYYGGSCYGIGEKGNVSYAFNSYYQQQKQDPKSCDFGGLGMITYLDPSMGEC | |||
| GH17 | 28 | 347 | 0 |
| IGVNWGTVSNHRAPPGVVVDLMRANRISKVKLFNADPGVLRALAGSGIQVMVGVTNDELASIAGSQAAADDWVAQNVSRYVGRSGVGIRYIAVGNEPFLT SYQGQFQSYIIPAMTNIQQSLVKANLASYVKLVVPCNADAYQSASVPSQGVFRTELTQLMTQLAAFLSSSGAPFVVNIYPFLSLYQNSDFPQDYAFFEGS THPVVDGPNVYYDAFDGNFDTLVSALSKIGYGNLPIAIGEIGWPTEGAPSANLTAARAFNQGLINRITSNKGTPLRPGVPPADVYLFSLLDEEGKSILPG NFERHWGIFSFDGQAKYPLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MAAGGPALLR ALLVAALCAV PWRAEAAIGV NWGTVSNHRA PPGVVVDLMR ANRISKVKLF 60 NADPGVLRAL AGSGIQVMVG VTNDELASIA GSQAAADDWV AQNVSRYVGR SGVGIRYIAV 120 GNEPFLTSYQ GQFQSYIIPA MTNIQQSLVK ANLASYVKLV VPCNADAYQS ASVPSQGVFR 180 TELTQLMTQL AAFLSSSGAP FVVNIYPFLS LYQNSDFPQD YAFFEGSTHP VVDGPNVYYD 240 AFDGNFDTLV SALSKIGYGN LPIAIGEIGW PTEGAPSANL TAARAFNQGL INRITSNKGT 300 PLRPGVPPAD VYLFSLLDEE GKSILPGNFE RHWGIFSFDG QAKYPLNLGL GNSVLKNAKE 360 VPYLPSRWCV ANPARDLDSV SDHMKLACSM ADCTTLYYGG SCYGIGEKGN VSYAFNSYYQ 420 QQKQDPKSCD FGGLGMITYL DPSMGECRFL VGVDDSKSSA VASCGGGCCG VCCGLWVLAL 480 WVLTYLRMMG SA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0001 | 172 | 339 | 177 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-18 | 367 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-32 | 368 | 449 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-80 | 28 | 347 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ06546.1 | 0 | 28 | 465 | 36 | 473 | hypothetical protein OsI_28792 [Oryza sativa Indica Group] |
| GenBank | EEC84224.1 | 0 | 24 | 491 | 21 | 487 | hypothetical protein OsI_30642 [Oryza sativa Indica Group] |
| RefSeq | NP_001062739.1 | 0 | 25 | 491 | 22 | 487 | Os09g0272300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001141759.1 | 0 | 1 | 492 | 1 | 492 | hypothetical protein LOC100273895 [Zea mays] |
| RefSeq | XP_002459936.1 | 0 | 22 | 492 | 22 | 492 | hypothetical protein SORBIDRAFT_02g017290 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 28 | 351 | 3 | 317 | A Chain A, E. Coli Gsp Amidase Cys59 Sulfenic Acid |
| PDB | 3ur8_A | 0 | 28 | 351 | 3 | 317 | A Chain A, E. Coli Gsp Amidase Cys59 Sulfenic Acid |
| PDB | 3ur7_B | 0 | 28 | 351 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 28 | 351 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 28 | 351 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
