| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G161540_T01 |
| Family | GT47 |
| Protein Properties | Length: 467 Molecular Weight: 51910.5 Isoelectric Point: 9.8225 |
| Chromosome | Chromosome/Scaffold: 1 Start: 1779988 End: 1782907 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 38 | 390 | 0 |
| CSGRRIHIRWLPARFNTHLLLYCATAFPLADPDSKSTPACASLANHGLGPRTHNGTRSWYRTDARLLEPFFHRRLLERACLVARPAQADAVFLPYYAALD ALPYVLHPDLLNSSALHGLPLARYLARNQPRVLARRHGHDHFFLLAGTAWDYSQPHDAEPRMYGTTSLLRLPELANFTVLTLESRTWPWQEHAIPHPTSF HPSSLPRLRSWTARARRSRRTALMLYAGGVSRPSRPNIRGAILAECANRTSSKSNNVCIVVDCSAAACALNPVAYMRPMLRANFCLQPPGDSPSRRSTFD AIVAGCVPVFFEHAAARAHYGWHLPRGRYDQFSVTIPKDSVVMGDVRITDVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 467 Download |
| MARRLLLLLL PIILTSSATA SKNKSSSLLP LPDGPDPCSG RRIHIRWLPA RFNTHLLLYC 60 ATAFPLADPD SKSTPACASL ANHGLGPRTH NGTRSWYRTD ARLLEPFFHR RLLERACLVA 120 RPAQADAVFL PYYAALDALP YVLHPDLLNS SALHGLPLAR YLARNQPRVL ARRHGHDHFF 180 LLAGTAWDYS QPHDAEPRMY GTTSLLRLPE LANFTVLTLE SRTWPWQEHA IPHPTSFHPS 240 SLPRLRSWTA RARRSRRTAL MLYAGGVSRP SRPNIRGAIL AECANRTSSK SNNVCIVVDC 300 SAAACALNPV AYMRPMLRAN FCLQPPGDSP SRRSTFDAIV AGCVPVFFEH AAARAHYGWH 360 LPRGRYDQFS VTIPKDSVVM GDVRITDVLA AVPADEVARM RERLLEIAPR VVYRRHGSAA 420 DLRESTKDAV DLAVEGVLRR IRRRVSALED GHPDAIYELE DDDGAH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-39 | 88 | 379 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG13471.2 | 0 | 36 | 462 | 30 | 459 | AC026758_8 hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | ACF22751.1 | 0 | 35 | 463 | 36 | 458 | exostosin family protein [Brachypodium distachyon] |
| GenBank | ACN36955.1 | 0 | 6 | 462 | 5 | 451 | unknown [Zea mays] |
| RefSeq | XP_002466037.1 | 0 | 38 | 463 | 45 | 479 | hypothetical protein SORBIDRAFT_01g050380 [Sorghum bicolor] |
| RefSeq | XP_002467522.1 | 0 | 6 | 462 | 5 | 446 | hypothetical protein SORBIDRAFT_01g029520 [Sorghum bicolor] |
