CAZyme Information

Basic Information
SpeciesZea mays
Cazyme IDGRMZM2G162505_T01
FamilyGH18
Protein PropertiesLength: 310 Molecular Weight: 33703.9 Isoelectric Point: 5.1786
ChromosomeChromosome/Scaffold: 1 Start: 240766113 End: 240767264
Description
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18682232.8e-23
  TTATEPPTPTNGQFNIFWQDSVLTASAVAAIKQSNPNVRVAVSIGGATVNDRPVFFNITSVDSWVQNAVSSLTTIIQKYNLDGIDIDYEQFQADPATFAE
  CIGRLVTTLKSNGVISFASIAPFDNADVQRHYQALWATYGSVIDYVNFQFYAYGAS
Full Sequence
Protein Sequence     Length: 310     Download
MGYSKRIALV LVAAVVALHV HVPMATAANS NLFRDYIGAI FNGVKFTDVP INPRVRFDYI    60
LAFVIDYTTA TEPPTPTNGQ FNIFWQDSVL TASAVAAIKQ SNPNVRVAVS IGGATVNDRP    120
VFFNITSVDS WVQNAVSSLT TIIQKYNLDG IDIDYEQFQA DPATFAECIG RLVTTLKSNG    180
VISFASIAPF DNADVQRHYQ ALWATYGSVI DYVNFQFYAY GASTTEAQYV DFFNQQLVNY    240
PGGNILASFT TAPTTTSVPI NTSLSACQTL QSQGKLYGIF IWAADHSRSQ GFKYDTQAQA    300
LLANAPAGY*                                                           360
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06548GH18_chitinase1.0e-79715660+
smart00636Glyco_182.0e-897214127+
pfam00704Glyco_hydro_181.0e-1264220166+
cd00598GH18_chitinase-like4.0e-1359218165+
cd06544GH18_narbonin9.0e-12632287257+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAO15366.10293092282AF330230_1 chitinase [Oryza sativa Japonica Group]
GenBankACF88258.1013091309unknown [Zea mays]
RefSeqNP_001064605.102930927307Os10g0416100 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001152001.1013091309chitinase 2 [Zea mays]
RefSeqXP_002467243.1013091310hypothetical protein SORBIDRAFT_01g021920 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B0323022273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A0323022273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A6e-30322874266A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB1itx_A0.000198156116172A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12
PDB3qok_A0.00029522198230A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
27
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EE17605327712770
EE03287727512750
EE17640727412740
EE04292326312630
CT853760285233070