| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G163138_T04 |
| Family | CBM57 |
| Protein Properties | Length: 441 Molecular Weight: 48704.2 Isoelectric Point: 4.6667 |
| Chromosome | Chromosome/Scaffold: 7 Start: 150904383 End: 150908003 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 211 | 371 | 9.5e-26 |
| CGSGKPAFDEDLNGIHWGGDRFWLGLQTLSSSSDDQSISSENVIAETLLAPNFYPQGIYQSAIVGTDRQPSLSFEMDVTPNKNYSVWLHFAEIDNGVTAE EQRVFDVLINGDTAFKDIDIIRMTGERFTALVLNKTVAVSGITLKIILQPVKGTRAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 441 Download |
| MRWRSPAVLR LQLWLLAVSA SLAALGVLAA DLSKEPFTIR ISCGSFDDVR TEPTNTLWYR 60 DFGYTGGRFA NATRPSFIVP PLKTLRYFPL SDGPENCYNI NNVPNGHYQV RLFFALLDNP 120 NLDSEPIFDV SVEGTLFSSL LLGWSSDDEK TFAEALVFVQ DSSLSVCFHS TGHGDPSILS 180 IEVLQIDDDA YNFGPPREKG TVLRAVKRLK CGSGKPAFDE DLNGIHWGGD RFWLGLQTLS 240 SSSDDQSISS ENVIAETLLA PNFYPQGIYQ SAIVGTDRQP SLSFEMDVTP NKNYSVWLHF 300 AEIDNGVTAE EQRVFDVLIN GDTAFKDIDI IRMTGERFTA LVLNKTVAVS GITLKIILQP 360 VKGTRAIINA IEVFEIIPAE KKTLPQEVSA LRTLKGSLGL PLRFGWNGDP CVPQQHPWSG 420 VDCQFDSTKG NWIIDGLYVL * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.0002 | 40 | 181 | 158 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam11721 | Malectin | 2.0e-13 | 208 | 371 | 176 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 4.0e-67 | 41 | 376 | 354 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 34 | 437 | 404 | + hypothetical protein; Provisional | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 36 | 437 | 24 | 425 | unnamed protein product [Vitis vinifera] |
| GenBank | EAZ39920.1 | 0 | 17 | 395 | 19 | 394 | hypothetical protein OsJ_24359 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059721.1 | 0 | 17 | 437 | 19 | 436 | Os07g0501800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002279791.1 | 0 | 39 | 437 | 1 | 399 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002462899.1 | 0 | 1 | 437 | 1 | 438 | hypothetical protein SORBIDRAFT_02g034070 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jwp_A | 0.005 | 258 | 336 | 46 | 119 | A Chain A, Malectin |
| PDB | 2kr2_A | 0.006 | 258 | 336 | 50 | 123 | A Chain A, Malectin |
| PDB | 2k46_A | 0.006 | 258 | 336 | 50 | 123 | A Chain A, Xenopus Laevis Malectin Complexed With Nigerose (Glcalpha1- 3glc) |
