| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G163883_T01 |
| Family | CBM43 |
| Protein Properties | Length: 260 Molecular Weight: 25722 Isoelectric Point: 7.6556 |
| Chromosome | Chromosome/Scaffold: 6 Start: 166809944 End: 166811348 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 86 | 168 | 1.3e-33 |
| WCVASPSAGAAVLQVALNYACGQGGADCSAVQRGGSCFSPDTVPDHASYAFNTYYQKNPVQTSCDFGGAAVLTTTNPSTSTCQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 260 Download |
| MALPLRPVHG LASLLLLLLV LLSCNCHCHG GGSERGAGAT KRLERDVTSP LATVPVVNPT 60 ATMPLPTATP AAPSLPLATG AGGGSWCVAS PSAGAAVLQV ALNYACGQGG ADCSAVQRGG 120 SCFSPDTVPD HASYAFNTYY QKNPVQTSCD FGGAAVLTTT NPSTSTCQYP ATSTGASVLN 180 TSTPLTPGYG SAPGGYGSSP PAGDGRSPPL YGNMSPPDYG DNTSAAVTVR ALPGRKTAAA 240 VVALATTSTW LLIALTVSG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-20 | 85 | 156 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-36 | 85 | 169 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79758.1 | 0 | 30 | 236 | 25 | 252 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
| GenBank | EEE64827.1 | 0 | 30 | 236 | 25 | 252 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056434.1 | 0 | 30 | 236 | 25 | 262 | Os05g0581900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131448.1 | 2.00386e-43 | 85 | 254 | 108 | 296 | hypothetical protein LOC100192780 [Zea mays] |
| RefSeq | XP_002441577.1 | 0 | 3 | 259 | 1 | 247 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-19 | 76 | 174 | 3 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
