| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G170839_T01 |
| Family | GH10 |
| Protein Properties | Length: 585 Molecular Weight: 65139.6 Isoelectric Point: 9.5024 |
| Chromosome | Chromosome/Scaffold: 1 Start: 132568513 End: 132571279 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 238 | 497 | 0 |
| GFPFGNAVTKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLK SVVSRYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGNGGLKLGVGLESHFSTP NIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 585 Download |
| MRVLVEKLLV SVFLAAFYSG CMVVSLEYDH TASIECLGDP MKPLYKGGIV QNSEFNSGLM 60 GWSTHRNVKA GVSRSPSGNK FAVVHGAGSY VSSSGKLLPS HSVYQRIQMQ SDRHYSLSAW 120 LQVSNGTSAH VRAVIKSPNG ERVIAGAIVA QSGCWSMLKG GMTAYSSGPA EIYFESHAPV 180 DIWVDSVSLQ PFTFDEWDGH TRRSADKVRR RTVKVVAMGA NDKPMAHANV SIELLRLGFP 240 FGNAVTKEIL GLPAYEKWFT SRFSVATFEN EMKWYSTEWT QNHEDYRVPD AMMNLMRKYK 300 IKVRGHNVFW DDQNSQMQWV KPLNLAQLKA AMQKRLKSVV SRYAGKVIHW DVVNENLHFN 360 FFETKLGPMA SAQIYQQVGQ LDRNAILFMN EFNTLEQPGD PNPVPAKYVA KMNQIRGYAG 420 NGGLKLGVGL ESHFSTPNIP YMRSSLDTLA KLKLPMWLTE VDVVKSPNQV KYLEQVLREG 480 FAHPNVDGIV MWAAWHARGC YVMCLTDNSF KNLPVGDLVD KLIAEWKTHR ASATTDHNGA 540 VELHLPLGDF KFTVSHPSLK AAAVQTMTVD NSASASQHTI NVKS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 2.0e-27 | 242 | 463 | 233 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 5.0e-42 | 239 | 492 | 274 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-74 | 272 | 519 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM08566.1 | 0 | 41 | 583 | 1 | 540 | AC092749_19 Putative 1,4-beta-xylanase [Oryza sativa Japonica Group] |
| GenBank | EEC66792.1 | 0 | 5 | 583 | 1 | 577 | hypothetical protein OsI_33191 [Oryza sativa Indica Group] |
| GenBank | EEE50812.1 | 0 | 41 | 583 | 1 | 532 | hypothetical protein OsJ_31205 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064415.1 | 0 | 5 | 583 | 1 | 577 | Os10g0351700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461545.1 | 0 | 33 | 584 | 8 | 567 | hypothetical protein SORBIDRAFT_02g004490 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-25 | 241 | 519 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1xyz_B | 3e-18 | 253 | 493 | 53 | 306 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 3e-18 | 253 | 493 | 53 | 306 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1e0v_A | 5e-18 | 226 | 493 | 1 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 6e-18 | 226 | 493 | 1 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
