| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G170839_T02 |
| Family | GH10 |
| Protein Properties | Length: 590 Molecular Weight: 65633.1 Isoelectric Point: 9.5025 |
| Chromosome | Chromosome/Scaffold: 1 Start: 132568513 End: 132571279 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 243 | 502 | 0 |
| GFPFGNAVTKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNLMRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLK SVVSRYAGKVIHWDVVNENLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQIRGYAGNGGLKLGVGLESHFSTP NIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQVLREGFAHPNVDGIVMWAAWHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 590 Download |
| MRVLVEKLLV SVFLAAFYSG CMVVSLEYDH TASIEASVVH CLGDPMKPLY KGGIVQNSEF 60 NSGLMGWSTH RNVKAGVSRS PSGNKFAVVH GAGSYVSSSG KLLPSHSVYQ RIQMQSDRHY 120 SLSAWLQVSN GTSAHVRAVI KSPNGERVIA GAIVAQSGCW SMLKGGMTAY SSGPAEIYFE 180 SHAPVDIWVD SVSLQPFTFD EWDGHTRRSA DKVRRRTVKV VAMGANDKPM AHANVSIELL 240 RLGFPFGNAV TKEILGLPAY EKWFTSRFSV ATFENEMKWY STEWTQNHED YRVPDAMMNL 300 MRKYKIKVRG HNVFWDDQNS QMQWVKPLNL AQLKAAMQKR LKSVVSRYAG KVIHWDVVNE 360 NLHFNFFETK LGPMASAQIY QQVGQLDRNA ILFMNEFNTL EQPGDPNPVP AKYVAKMNQI 420 RGYAGNGGLK LGVGLESHFS TPNIPYMRSS LDTLAKLKLP MWLTEVDVVK SPNQVKYLEQ 480 VLREGFAHPN VDGIVMWAAW HARGCYVMCL TDNSFKNLPV GDLVDKLIAE WKTHRASATT 540 DHNGAVELHL PLGDFKFTVS HPSLKAAAVQ TMTVDNSASA SQHTINVKS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 2.0e-27 | 247 | 468 | 233 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 5.0e-42 | 244 | 497 | 274 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-74 | 277 | 524 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM08566.1 | 0 | 46 | 588 | 1 | 540 | AC092749_19 Putative 1,4-beta-xylanase [Oryza sativa Japonica Group] |
| GenBank | EEC66792.1 | 0 | 5 | 588 | 1 | 577 | hypothetical protein OsI_33191 [Oryza sativa Indica Group] |
| GenBank | EEE50812.1 | 0 | 46 | 588 | 1 | 532 | hypothetical protein OsJ_31205 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064415.1 | 0 | 5 | 588 | 1 | 577 | Os10g0351700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461545.1 | 0 | 39 | 589 | 9 | 567 | hypothetical protein SORBIDRAFT_02g004490 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 4e-25 | 246 | 524 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1xyz_B | 4e-18 | 258 | 498 | 53 | 306 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 4e-18 | 258 | 498 | 53 | 306 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1e0v_A | 5e-18 | 231 | 498 | 1 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 6e-18 | 231 | 498 | 1 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
