| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G172602_T01 |
| Family | GT47 |
| Protein Properties | Length: 462 Molecular Weight: 51792 Isoelectric Point: 8.4683 |
| Chromosome | Chromosome/Scaffold: 1 Start: 234825659 End: 234827080 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 62 | 402 | 0 |
| CRGRYLYVHDLPPRFNADIVRGCAEANDRWQDMCEDMRNAGLGRPLSGGALTGARGWYATHQFALDAIFHGRMRQHGCLTNDSSAAAAVFVPFYAGFEFA RHVWGYDSAARDAASLDLVRWLVQRPEWRRAGGRDHFLVAGRTGWDFRRDRNSTWGTNLFLLPAVKNMTFIVVETATMGWGNDMAVPYPTYFHPRTDFDV LSWQQRIRNSDRWWFMSFVGAARPSDPRSIRSQVMAQCGASPACRQLGCAFGSAQCHYPGDIMVLFQSSTFCLQPPGDSASRRSTFDAMVAGCIPVFFQP RSAYLQYRWHLPRDHATYSVFIPAEDVRSGNVSVEAELRKI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 462 Download |
| MVKPSAVSRP CFLLVTAAAL WALTLYLRLL ALMSVPVAFT GRVASFVPDD TTNASVAGDD 60 PCRGRYLYVH DLPPRFNADI VRGCAEANDR WQDMCEDMRN AGLGRPLSGG ALTGARGWYA 120 THQFALDAIF HGRMRQHGCL TNDSSAAAAV FVPFYAGFEF ARHVWGYDSA ARDAASLDLV 180 RWLVQRPEWR RAGGRDHFLV AGRTGWDFRR DRNSTWGTNL FLLPAVKNMT FIVVETATMG 240 WGNDMAVPYP TYFHPRTDFD VLSWQQRIRN SDRWWFMSFV GAARPSDPRS IRSQVMAQCG 300 ASPACRQLGC AFGSAQCHYP GDIMVLFQSS TFCLQPPGDS ASRRSTFDAM VAGCIPVFFQ 360 PRSAYLQYRW HLPRDHATYS VFIPAEDVRS GNVSVEAELR KIPPAAIEKM RKEVIKLVPR 420 LLYADPRYKL ETMKDAFDVT VDGVLERMAE TDDSQTGSYW R* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-59 | 61 | 402 | 354 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO17347.1 | 0 | 60 | 461 | 227 | 632 | Hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | EEE58313.1 | 0 | 60 | 461 | 261 | 666 | hypothetical protein OsJ_09380 [Oryza sativa Japonica Group] |
| RefSeq | NP_001048943.1 | 0 | 60 | 461 | 83 | 488 | Os03g0144300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002464522.1 | 0 | 1 | 461 | 1 | 459 | hypothetical protein SORBIDRAFT_01g020060 [Sorghum bicolor] |
| RefSeq | XP_002468519.1 | 0 | 12 | 455 | 14 | 453 | hypothetical protein SORBIDRAFT_01g047290 [Sorghum bicolor] |
