| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G175417_T01 |
| Family | GT47 |
| Protein Properties | Length: 279 Molecular Weight: 30796.1 Isoelectric Point: 7.1182 |
| Chromosome | Chromosome/Scaffold: 1 Start: 248080644 End: 248081951 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 29 | 262 | 7.3e-22 |
| CAGRRIHIRGLPPHFNTDLLRHCDANAFPLADPSAAATSVPPCESLADHGLGPRTHPHNRSWYCNDARLLEAFFHRRILERDCLADDLADVVFLPYYAAL NALSYVIDPALLDESTRHGVALAEFLSPDQAHILPRWHGHDHFLVVAGSTWDYAQSPGVDPRLWGSSSLLRLPELANFTSLTLESRTWPWQEHAIPHPTS FHPSSLGHLRSWLAHARRLRCATLMLFAGGASRP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 279 Download |
| MVNPLLIFLP FLSVTALPGT ADAAGPDPCA GRRIHIRGLP PHFNTDLLRH CDANAFPLAD 60 PSAAATSVPP CESLADHGLG PRTHPHNRSW YCNDARLLEA FFHRRILERD CLADDLADVV 120 FLPYYAALNA LSYVIDPALL DESTRHGVAL AEFLSPDQAH ILPRWHGHDH FLVVAGSTWD 180 YAQSPGVDPR LWGSSSLLRL PELANFTSLT LESRTWPWQE HAIPHPTSFH PSSLGHLRSW 240 LAHARRLRCA TLMLFAGGAS RPCRPLLGQT VLGYRWTV* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-16 | 82 | 271 | 200 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG13471.2 | 0 | 27 | 273 | 30 | 283 | AC026758_8 hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | ACN36955.1 | 0 | 1 | 272 | 1 | 274 | unknown [Zea mays] |
| RefSeq | NP_001065337.1 | 0 | 27 | 273 | 169 | 422 | Os10g0553600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002466037.1 | 0 | 29 | 273 | 45 | 296 | hypothetical protein SORBIDRAFT_01g050380 [Sorghum bicolor] |
| RefSeq | XP_002467522.1 | 0 | 1 | 272 | 1 | 269 | hypothetical protein SORBIDRAFT_01g029520 [Sorghum bicolor] |
