CAZyme Information

Basic Information
SpeciesZea mays
Cazyme IDGRMZM2G175698_T02
FamilyPL4
Protein PropertiesLength: 575 Molecular Weight: 63519.5 Isoelectric Point: 7.7007
ChromosomeChromosome/Scaffold: 5 Start: 111537704 End: 111541969
DescriptionRhamnogalacturonate lyase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
PL445410
  VILHYRLVVLKGSSGFYCYAILEHARDWPALNVTEARLAFKLNTDAFKYMAVSDDIQRYMPSAADRAEPRGAPLAYKEAVLLVNPQEPRFRGEVDDKYQY
  SMDNKDSTVHGWTTAGGVERSPNDNPVVGFWVITPSNEFKSGGPTKRELTSHVGPTTLTMFLGTHYVGNDIVLSISGGEYWKKVMGPVFVYLNSRPRRGG
  IGGCDHSRALWADAKAQARAEAGKWPYSFPKSPDFAKAGERGGVTGRLLVRDDDRFTTDDDNNDAAAAPMPVGTEAYVGLAAPGQAGSWVTECKGYQFWT
  ATTATEDGFVFTIANVREGVYSLYAWVPGVLGEYVHASPVTVAVGGAVVDLGDLVFRPPRSGPTLWEIGVPDRKAAEFFVPDVDPRFANRLFLHKDRYRQ
  YGLWARYAELYPDGDPVFTVGRSEPWKDWFFAHVTRKVGEGRYAPTTREIRFRLYRVVADGTYTLRVSLAAAHMSRLQVRVNGRGGGGAAELTTPEFGGG
  NAIARHGIHGVQWNFQFPIRGYLLREGDNSVSITQTRA
Full Sequence
Protein Sequence     Length: 575     Download
MDPVILHYRL VVLKGSSGFY CYAILEHARD WPALNVTEAR LAFKLNTDAF KYMAVSDDIQ    60
RYMPSAADRA EPRGAPLAYK EAVLLVNPQE PRFRGEVDDK YQYSMDNKDS TVHGWTTAGG    120
VERSPNDNPV VGFWVITPSN EFKSGGPTKR ELTSHVGPTT LTMFLGTHYV GNDIVLSISG    180
GEYWKKVMGP VFVYLNSRPR RGGIGGCDHS RALWADAKAQ ARAEAGKWPY SFPKSPDFAK    240
AGERGGVTGR LLVRDDDRFT TDDDNNDAAA APMPVGTEAY VGLAAPGQAG SWVTECKGYQ    300
FWTATTATED GFVFTIANVR EGVYSLYAWV PGVLGEYVHA SPVTVAVGGA VVDLGDLVFR    360
PPRSGPTLWE IGVPDRKAAE FFVPDVDPRF ANRLFLHKDR YRQYGLWARY AELYPDGDPV    420
FTVGRSEPWK DWFFAHVTRK VGEGRYAPTT REIRFRLYRV VADGTYTLRV SLAAAHMSRL    480
QVRVNGRGGG GAAELTTPEF GGGNAIARHG IHGVQWNFQF PIRGYLLREG DNSVSITQTR    540
ADGEFLGVLY DYVRLEAPPA HCRDPTATAT TWRT* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd10316RGL4_M1.0e-1624334199+
cd10317RGL4_C3.0e-43369556189+
pfam06045Rhamnogal_lyase3.0e-4539795+
cd10320RGL4_N7.0e-508197190+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankABA96404.109568156699LG27/30-like gene, putative, expressed [Oryza sativa (japonica cultivar-group)]
DDBJBAF27519.2010566115641Os11g0134100 [Oryza sativa Japonica Group]
RefSeqNP_001066077.109568156686Os12g0131900 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001152385.109574159724lyase [Zea mays]
RefSeqXP_002441731.109565174719hypothetical protein SORBIDRAFT_08g001440 [Sorghum bicolor]
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EE18195225312530
DV16415025312530
EE18791425312530
EE17461725312530
EE1728412752725460