CAZyme Information

Basic Information
SpeciesZea mays
Cazyme IDGRMZM2G175698_T04
FamilyPL4
Protein PropertiesLength: 523 Molecular Weight: 57519.5 Isoelectric Point: 7.3763
ChromosomeChromosome/Scaffold: 5 Start: 111537704 End: 111541969
DescriptionRhamnogalacturonate lyase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
PL4184890
  AEPRGAPLAYKEAVLLVNPQEPRFRGEVDDKYQYSMDNKDSTVHGWTTAGGVERSPNDNPVVGFWVITPSNEFKSGGPTKRELTSHVGPTTLTMFLGTHY
  VGNDIVLSISGGEYWKKVMGPVFVYLNSRPRRGGIGGCDHSRALWADAKAQARAEAGKWPYSFPKSPDFAKAGERGGVTGRLLVRDDDRFTTDDDNNDAA
  AAPMPVGTEAYVGLAAPGQAGSWVTECKGYQFWTATTATEDGFVFTIANVREGVYSLYAWVPGVLGEYVHASPVTVAVGGAVVDLGDLVFRPPRSGPTLW
  EIGVPDRKAAEFFVPDVDPRFANRLFLHKDRYRQYGLWARYAELYPDGDPVFTVGRSEPWKDWFFAHVTRKVGEGRYAPTTREIRFRLYRVVADGTYTLR
  VSLAAAHMSRLQVRVNGRGGGGAAELTTPEFGGGNAIARHGIHGVQWNFQFPIRGYLLREGDNSVSITQTRA
Full Sequence
Protein Sequence     Length: 523     Download
MAVSDDIQRY MPSAADRAEP RGAPLAYKEA VLLVNPQEPR FRGEVDDKYQ YSMDNKDSTV    60
HGWTTAGGVE RSPNDNPVVG FWVITPSNEF KSGGPTKREL TSHVGPTTLT MFLGTHYVGN    120
DIVLSISGGE YWKKVMGPVF VYLNSRPRRG GIGGCDHSRA LWADAKAQAR AEAGKWPYSF    180
PKSPDFAKAG ERGGVTGRLL VRDDDRFTTD DDNNDAAAAP MPVGTEAYVG LAAPGQAGSW    240
VTECKGYQFW TATTATEDGF VFTIANVREG VYSLYAWVPG VLGEYVHASP VTVAVGGAVV    300
DLGDLVFRPP RSGPTLWEIG VPDRKAAEFF VPDVDPRFAN RLFLHKDRYR QYGLWARYAE    360
LYPDGDPVFT VGRSEPWKDW FFAHVTRKVG EGRYAPTTRE IRFRLYRVVA DGTYTLRVSL    420
AAAHMSRLQV RVNGRGGGGA AELTTPEFGG GNAIARHGIH GVQWNFQFPI RGYLLREGDN    480
SVSITQTRAD GEFLGVLYDY VRLEAPPAHC RDPTATATTW RT* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd10316RGL4_M2.0e-1619128999+
pfam06045Rhamnogal_lyase4.0e-1814545+
cd10320RGL4_N6.0e-368145138+
cd10317RGL4_C4.0e-43317504189+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAF27519.201514158641Os11g0134100 [Oryza sativa Japonica Group]
RefSeqNP_001066077.101516200686Os12g0131900 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001152385.101522203724lyase [Zea mays]
RefSeqXP_002441731.101513218719hypothetical protein SORBIDRAFT_08g001440 [Sorghum bicolor]
RefSeqXP_002450207.101507189678hypothetical protein SORBIDRAFT_05g001980 [Sorghum bicolor]
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EE1728412752204940
EE0396152552364900
EC8736382482204670
EE02406420112010
EE17206420112010