CAZyme Information

Basic Information
SpeciesZea mays
Cazyme IDGRMZM2G175698_T06
FamilyPL4
Protein PropertiesLength: 610 Molecular Weight: 67655 Isoelectric Point: 9.1333
ChromosomeChromosome/Scaffold: 5 Start: 111538131 End: 111541969
DescriptionRhamnogalacturonate lyase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
PL464750
  DSTEFKVVVSSEDQVELSFSSAYTPSSPTSVHLHVDKRLVVLKGSSGFYCYAILEHARDWPALNVTEARLAFKLNTDAFKYMAVSDDIQRYMPSAADRAE
  PRGAPLAYKEAVLLVNPQEPRFRGEVDDKYQYSMDNKDSTVHGWTTAGGVERSPNDNPVVGFWVITPSNEFKSGGPTKRELTSHVGPTTLTMFLGTHYVG
  NDIVLSISGGEYWKKVMGPVFVYLNSRPRRGGIGGCDHSRALWADAKAQARAEAGKWPYSFPKSPDFAKAGERGGVTGRLLVRDDDRFTTDDDNNDAAAA
  PMPVGTEAYVGLAAPGQAGSWVTECKGYQFWTATTATEDGFVFTIANVREGVYSLYAWVPGVLGEYVHASPVTVAVGGAVVDLGDLVFRPPRSGPTLWEI
  GVPDRKAAEFFVPDVDPRFANRLFLHKDRYRQYGLWARYAELYPDGDPVFTVGRSEPWKDWFFAHVTRSE
Full Sequence
Protein Sequence     Length: 610     Download
MMDTLDSTEF KVVVSSEDQV ELSFSSAYTP SSPTSVHLHV DKRLVVLKGS SGFYCYAILE    60
HARDWPALNV TEARLAFKLN TDAFKYMAVS DDIQRYMPSA ADRAEPRGAP LAYKEAVLLV    120
NPQEPRFRGE VDDKYQYSMD NKDSTVHGWT TAGGVERSPN DNPVVGFWVI TPSNEFKSGG    180
PTKRELTSHV GPTTLTMFLG THYVGNDIVL SISGGEYWKK VMGPVFVYLN SRPRRGGIGG    240
CDHSRALWAD AKAQARAEAG KWPYSFPKSP DFAKAGERGG VTGRLLVRDD DRFTTDDDNN    300
DAAAAPMPVG TEAYVGLAAP GQAGSWVTEC KGYQFWTATT ATEDGFVFTI ANVREGVYSL    360
YAWVPGVLGE YVHASPVTVA VGGAVVDLGD LVFRPPRSGP TLWEIGVPDR KAAEFFVPDV    420
DPRFANRLFL HKDRYRQYGL WARYAELYPD GDPVFTVGRS EPWKDWFFAH VTRSEGRRRP    480
VRADDAGDPI QAVPRRGRRH VHAACVARCR AHVQAAGARE WAGRWRCGGA DHTGVRRRER    540
HRAPRDPWSA VELPVPNQGI PAAGRRQQRQ HHADQGRRRV PRCLVRLRPP RGTSGALPRP    600
HGHGDDVAYM 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd10317RGL4_C4.0e-1240347472+
cd10316RGL4_M6.0e-1727737599+
cd10320RGL4_N6.0e-536231226+
pfam06045Rhamnogal_lyase3.0e-613131129+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankABA96404.101476114574LG27/30-like gene, putative, expressed [Oryza sativa (japonica cultivar-group)]
DDBJBAF29096.201476114574Os12g0131900 [Oryza sativa Japonica Group]
RefSeqNP_001066077.101476114561Os12g0131900 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001152385.101481117599lyase [Zea mays]
RefSeqXP_002441731.101473132586hypothetical protein SORBIDRAFT_08g001440 [Sorghum bicolor]
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EC881475278102870
EE184030264242870
EE186325263252870
EE042619263252870
EE176009262262870