| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G177940_T01 |
| Family | CE8 |
| Protein Properties | Length: 400 Molecular Weight: 43427 Isoelectric Point: 9.0827 |
| Chromosome | Chromosome/Scaffold: 3 Start: 199246839 End: 199249071 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 92 | 393 | 0 |
| LVVDKDPALGDFTTIQAAVDSLPAINLVRVVIRVNAGTYTEKVTVSAMRAFITLEGAGADKTVVQWGDTADSPTGPKGRPLGTFNSASFAVNAQYFLARN ITFKFWRWRAGQNTSPVPKPGAAGKQAVALRVSADNAAFVGCRFLGAQDTLYDHSGRHYYKDCYIQGSVDFIFGNALSLYEDCHVHAIARDYGALTAQNR QSMLEDTGFSFVNCRVTGSGALYLGRAWGTFSRVVFAYTHMDDIIVPNGWFNWGDPNRELTVFYGQYKCTGPGATYAGRVAWSHELTDDEAKPFISLSFI DG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 400 Download |
| MGTPRARLLA RIAVAAVVLL APTTTCGVAG HSRALRPGGG RGQQQPSSLF PANATRAEAI 60 ERQFVEWVRY VGGLRHSTFQ HAVARASPSY SLVVDKDPAL GDFTTIQAAV DSLPAINLVR 120 VVIRVNAGTY TEKVTVSAMR AFITLEGAGA DKTVVQWGDT ADSPTGPKGR PLGTFNSASF 180 AVNAQYFLAR NITFKFWRWR AGQNTSPVPK PGAAGKQAVA LRVSADNAAF VGCRFLGAQD 240 TLYDHSGRHY YKDCYIQGSV DFIFGNALSL YEDCHVHAIA RDYGALTAQN RQSMLEDTGF 300 SFVNCRVTGS GALYLGRAWG TFSRVVFAYT HMDDIIVPNG WFNWGDPNRE LTVFYGQYKC 360 TGPGATYAGR VAWSHELTDD EAKPFISLSF IDGTEWVRL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 2.0e-113 | 86 | 398 | 313 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 1.0e-113 | 101 | 397 | 298 | + probable pectinesterase | ||
| PLN02304 | PLN02304 | 2.0e-115 | 92 | 398 | 315 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 4.0e-116 | 74 | 396 | 325 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 0 | 48 | 399 | 352 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN26093.1 | 0 | 1 | 399 | 1 | 399 | unknown [Zea mays] |
| GenBank | ACR36293.1 | 0 | 1 | 399 | 1 | 391 | unknown [Zea mays] |
| DDBJ | BAD87905.1 | 0 | 14 | 351 | 9 | 336 | pectinesterase-like [Oryza sativa Japonica Group] |
| RefSeq | NP_001044216.1 | 0 | 14 | 399 | 9 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002458469.1 | 0 | 1 | 399 | 1 | 402 | hypothetical protein SORBIDRAFT_03g034250 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 101 | 398 | 17 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 5.60519e-45 | 101 | 398 | 13 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 1e-28 | 90 | 376 | 31 | 347 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 5e-18 | 89 | 385 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 5e-18 | 89 | 385 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
