| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G177940_T04 |
| Family | CE8 |
| Protein Properties | Length: 199 Molecular Weight: 21024 Isoelectric Point: 11.1813 |
| Chromosome | Chromosome/Scaffold: 3 Start: 199246839 End: 199247882 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 92 | 195 | 7.5e-30 |
| LVVDKDPALGDFTTIQAAVDSLPAINLVRVVIRVNAGTYTEKVTVSAMRAFITLEGAGADKTVVQWGDTADSPTGPKGRPLGTFNSASFAVNAQYFLARN ITFK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 199 Download |
| MGTPRARLLA RIAVAAVVLL APTTTCGVAG HSRALRPGGG RGQQQPSSLF PANATRAEAI 60 ERQFVEWVRY VGGLRHSTFQ HAVARASPSY SLVVDKDPAL GDFTTIQAAV DSLPAINLVR 120 VVIRVNAGTY TEKVTVSAMR AFITLEGAGA DKTVVQWGDT ADSPTGPKGR PLGTFNSASF 180 AVNAQYFLAR NITFKVRT* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 3.0e-19 | 74 | 195 | 122 | + pectinesterase family protein | ||
| PLN02773 | PLN02773 | 3.0e-19 | 98 | 195 | 101 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 4.0e-20 | 93 | 194 | 102 | + Pectinesterase. | ||
| PLN02634 | PLN02634 | 2.0e-27 | 101 | 195 | 95 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 4.0e-85 | 48 | 195 | 148 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN26093.1 | 0 | 1 | 195 | 1 | 195 | unknown [Zea mays] |
| GenBank | ACR36293.1 | 0 | 1 | 195 | 1 | 195 | unknown [Zea mays] |
| DDBJ | BAD87905.1 | 0 | 14 | 195 | 9 | 188 | pectinesterase-like [Oryza sativa Japonica Group] |
| RefSeq | NP_001044216.1 | 0 | 14 | 195 | 9 | 188 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002458469.1 | 0 | 1 | 196 | 1 | 199 | hypothetical protein SORBIDRAFT_03g034250 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3uw0_A | 0.00000004 | 90 | 195 | 31 | 132 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1gq8_A | 0.0000005 | 101 | 195 | 17 | 104 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.007 | 101 | 195 | 13 | 100 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
