| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G179354_T01 |
| Family | CBM43 |
| Protein Properties | Length: 483 Molecular Weight: 50408.9 Isoelectric Point: 7.4742 |
| Chromosome | Chromosome/Scaffold: 1 Start: 192476772 End: 192478750 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 389 | 476 | 2.3e-27 |
| WCVLASGGGKAANETAVSAAVAYACQHGSRTCAAIQPGGACHEPDALDAHASYAFNAYWQQFRSAGGTCFFDGLAETTTEDPSHGLCK | |||
| GH17 | 47 | 369 | 0 |
| LGINYGTVADDLPSASRSVQLLRAAGASAVKIYDANADILRALAGTGVPVSIMVPNSAIPSLASSRAAAEAWVAANLAPHIPATRVAHLLVGNEVLSNRA IAASTWRGVVPAMANLRRALRARGLRGVKLGTTLAMDALSASYPPSAGAFRGDIAEDVVLPLLRFLNATRSYYFVDAYPYFAWAGNRDAISLDYALFQGA AGSRYVDPGNGLTYTNLLDQMLDAVVAAMGRLGYGNVRLAVSETGWPSGGDAGEAGANVRNAATYNRNLALRMSNSPGTPARPGAEVPVFLFSLYNEDRK PGPGSERHWGLYYPNGSMVYELD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 483 Download |
| MTPSSTCHAV AVLLLLAAAT LACHFSVFVV ATDVECHCHG AKGCRGLGIN YGTVADDLPS 60 ASRSVQLLRA AGASAVKIYD ANADILRALA GTGVPVSIMV PNSAIPSLAS SRAAAEAWVA 120 ANLAPHIPAT RVAHLLVGNE VLSNRAIAAS TWRGVVPAMA NLRRALRARG LRGVKLGTTL 180 AMDALSASYP PSAGAFRGDI AEDVVLPLLR FLNATRSYYF VDAYPYFAWA GNRDAISLDY 240 ALFQGAAGSR YVDPGNGLTY TNLLDQMLDA VVAAMGRLGY GNVRLAVSET GWPSGGDAGE 300 AGANVRNAAT YNRNLALRMS NSPGTPARPG AEVPVFLFSL YNEDRKPGPG SERHWGLYYP 360 NGSMVYELDL TGRRSSYPPL PSADSAPAWC VLASGGGKAA NETAVSAAVA YACQHGSRTC 420 AAIQPGGACH EPDALDAHAS YAFNAYWQQF RSAGGTCFFD GLAETTTEDP SHGLCKFARS 480 LD* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-6 | 221 | 361 | 146 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-9 | 389 | 463 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 9.0e-25 | 389 | 477 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-89 | 47 | 369 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN29077.1 | 0 | 99 | 482 | 1 | 384 | unknown [Zea mays] |
| DDBJ | BAF24208.2 | 0 | 34 | 472 | 20 | 468 | Os08g0525800 [Oryza sativa Japonica Group] |
| GenBank | EAZ07710.1 | 0 | 34 | 474 | 20 | 470 | hypothetical protein OsI_29967 [Oryza sativa Indica Group] |
| RefSeq | NP_001062294.1 | 0 | 34 | 472 | 20 | 468 | Os08g0525800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002444717.1 | 0 | 1 | 482 | 1 | 484 | hypothetical protein SORBIDRAFT_07g026540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 47 | 370 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 47 | 370 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 47 | 370 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 47 | 370 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 47 | 370 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
